RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	SMM1	P53720	384 aa	Known RBP	3.03	□□□□□ -1.92
TMA108	YIL137C	SDC1	Q03323	175 aa		3.03	□□□□□ -1.92
TMA108	YIL137C	BBP1	Q12365	385 aa		3.03	□□□□□ -1.92
TMA108	YIL137C	YBL112C	Q3E7Y4	105 aa		3.03	□□□□□ -1.92
TMA108	YIL137C	MDM10	P18409	493 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	ERD2	P18414	219 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	GAS1	P22146	559 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	MAK31	P23059	88 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	APE2	P32454	952 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	ZRT1	P32804	376 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	YBR062C	P38239	180 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	PHO88	P38264	188 aa	Predicted RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	YPT35	P38815	214 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	PRY1	P47032	299 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	SUR7	P54003	302 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	DYN3	Q04949	312 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	SAM2	P19358	384 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	RPS1B	P23248	255 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	ILV6	P25605	309 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	FUN26	P31381	517 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	SPT4	P32914	102 aa	Predicted RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	APL3	P38065	1025 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	RCK1	P38622	512 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	ECM14	P38836	430 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	PET8	P38921	284 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	RBG1	P39729	369 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	MMF1	P40185	145 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	TES1	P41903	349 aa	Known RBP	3.02	□□□□□ -1.93
TMA108	YIL137C	HMS2	P47175	358 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	GTR2	P53290	341 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	YMR027W	Q04371	470 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	ERP3	Q12403	225 aa		3.02	□□□□□ -1.93
TMA108	YIL137C	KIN28	P06242	306 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	MRP2	P10663	115 aa	Predicted RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	RPB8	P20436	146 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	AIM17	P23180	465 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	EXG1	P23776	448 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	CPR3	P25719	182 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	UTP11	P34247	250 aa	Predicted RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	YHL044W	P38727	235 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	WSC4	P38739	605 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	SMX3	P54999	86 aa	Predicted RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	STP1	Q00947	519 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	LGE1	Q02796	332 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	POM33	Q12164	279 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	TOM1	Q03280	3268 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YOR304C-A	O14468	76 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	RPL20A	P0CX23	172 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	RPL20B	P0CX24	172 aa	Predicted RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	YCR006C	P25350	157 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	ATG15	P25641	520 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	PDC2	P32896	925 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	CUE1	P38428	203 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	LYS1	P38998	373 aa	RIP-Chip data	3.01	□□□□□ -1.93	not detected
TMA108	YIL137C	KRE29	P40026	464 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	COQ5	P49017	307 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YLR446W	Q06204	433 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	HRD1	Q08109	551 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	NCA2	Q12374	616 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	RIF1	P29539	1916 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	SCL1	P21243	252 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	TIR2	P33890	251 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	TSA1	P34760	196 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	CPR5	P35176	225 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	CBP4	P37267	147 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	LAG1	P38703	411 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YFL064C	P43540	174 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	GUF1	P46943	645 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	ECL1	P48235	211 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	ATP23	P53722	227 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	CWC25	P53854	179 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	YNL184C	P53876	108 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YMD8	Q03697	442 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YDR249C	Q03787	373 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	PEX30	Q06169	523 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	THI20	Q08224	551 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	THI72	Q08579	599 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	YPR202W	Q08993	238 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	THP3	Q12049	470 aa	Known RBP	3.01	□□□□□ -1.93
TMA108	YIL137C	DAS2	Q12084	232 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	MCT1	Q12283	360 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	ICT1	Q12385	394 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	PRM4	Q12498	284 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	BI3	Q9ZZW7	517 aa		3.01	□□□□□ -1.93
TMA108	YIL137C	ILV1	P00927	576 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	SFK1	P35735	353 aa		3	□□□□□ -1.93
TMA108	YIL137C	SDS24	P38314	527 aa		3	□□□□□ -1.93
TMA108	YIL137C	YJR012C	P47087	207 aa		3	□□□□□ -1.93
TMA108	YIL137C	RBL2	P48606	106 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	YPS5	P53057	165 aa		3	□□□□□ -1.93
TMA108	YIL137C	YGL034C	P53186	121 aa		3	□□□□□ -1.93
TMA108	YIL137C	MSA1	Q08471	629 aa		3	□□□□□ -1.93
TMA108	YIL137C	FRE8	Q12209	686 aa		3	□□□□□ -1.93
TMA108	YIL137C	RPL28	P02406	149 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	RPL7A	P05737	244 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	HIS3	P06633	220 aa		3	□□□□□ -1.93
TMA108	YIL137C	UBI4	P0CG63	381 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	IDP1	P21954	428 aa	Known RBP	3	□□□□□ -1.93
TMA108	YIL137C	SPO11	P23179	398 aa		3	□□□□□ -1.93
TMA108	YIL137C	HSP30	P25619	332 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms