RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	FDH1	Q08911	376 aa		2.25	□□□□□ -2.05
SPB1	YCL054W	YDL109C	Q12103	647 aa		2.25	□□□□□ -2.05
SPB1	YCL054W	ERV2	Q12284	196 aa		2.25	□□□□□ -2.05
SPB1	YCL054W	PCL9	Q12477	304 aa		2.25	□□□□□ -2.05
SPB1	YCL054W	HTB1	P02293	131 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	HTB2	P02294	131 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	RPS18A	P0CX55	146 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	RPS18B	P0CX56	146 aa	Predicted RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	MIR1	P23641	311 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	CPR3	P25719	182 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	ITR2	P30606	609 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	CSE1	P33307	960 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	VPS51	P36116	164 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YBR062C	P38239	180 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	MDM31	P38880	579 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	FRT2	P39734	528 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	SMB1	P40018	196 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	YIL029C	P40538	142 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	EGT2	P42835	1041 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	IBA57	P47158	497 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	PEX31	P53203	462 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	SHY1	P53266	389 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YNL140C	P53910	189 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	FAR10	Q06001	478 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	SEC10	Q06245	871 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	NDE2	Q07500	545 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	MIM1	Q08176	113 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YOR376W	Q08900	122 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	EAF3	Q12432	401 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	MEC1	P38111	2368 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	PHO2	P07269	559 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	FPR1	P20081	114 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	POF1	P25576	258 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YCR102C	P25608	368 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YPT52	P36018	234 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	PRS2	P38620	318 aa	Known RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	POG1	P40473	351 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	ICE2	P40499	491 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	GAB1	P41733	394 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	SSU72	P53538	206 aa	Predicted RBP	2.24	□□□□□ -2.05
SPB1	YCL054W	ZRG17	P53735	605 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	VAC7	P53950	1165 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	YLR046C	Q12253	270 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	PRM4	Q12498	284 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	IZH4	Q99393	312 aa		2.24	□□□□□ -2.05
SPB1	YCL054W	MSI1	P13712	422 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	FBA1	P14540	359 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	CMK2	P22517	447 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	TPS2	P31688	896 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	NUP2	P32499	720 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	AST1	P35183	429 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	ECM8	P38246	354 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	IKI1	P38874	309 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	KRE9	P39005	276 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	YEL028W	P39989	153 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	DDI1	P40087	428 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	SER33	P40510	469 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	AIM23	P47015	356 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	MGA1	P53050	456 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	EMC4	P53073	190 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	GET1	P53192	235 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	CTF19	Q02732	369 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	YMR114C	Q04471	368 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	SPC2	Q04969	178 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	RIF2	Q06208	395 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	ESA1	Q08649	445 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	DAS2	Q12084	232 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	EFG1	Q3E705	233 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	YLR462W	O13556	202 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	TFS1	P14306	219 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	GIT1	P25346	518 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	BMT2	P38278	337 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	YHL049C	P38722	271 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	THO1	P40040	218 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	DFG10	P40526	253 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	YFL064C	P43540	174 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	ATG18	P43601	500 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	TPN1	P53099	579 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	FLC3	P53121	802 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	TIM13	P53299	105 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	CWC25	P53854	179 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	PRP38	Q00723	242 aa	Predicted RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	PIR1	Q03178	341 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	RSA1	Q08932	381 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	PER33	Q12144	273 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	ATP16	Q12165	160 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	PEX11	Q12462	236 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	LSO2	Q3E772	92 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	YBR298C-A	Q8TGK4	73 aa		2.23	□□□□□ -2.05
SPB1	YCL054W	BRR2	P32639	2163 aa	Known RBP	2.23	□□□□□ -2.05
SPB1	YCL054W	TPI1	P00942	248 aa	Known RBP	2.22	□□□□□ -2.05
SPB1	YCL054W	RAD10	P06838	210 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	CBS2	P14905	389 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	URA6	P15700	204 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	SRX1	P36077	127 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	AIM18	P38884	321 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	PEX22	P39718	180 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	PAN6	P40459	309 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	YNL320W	P42840	284 aa		2.22	□□□□□ -2.05
SPB1	YCL054W	LSM1	P47017	172 aa	Known RBP	2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 60 ms