RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MYMKA6NI61 221 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 CLDN3O15551 220 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 CUTAO60888 179 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 LILRB3O75022 631 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 TADA2AO75478 443 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.22
PHGDH-231ENST00000641939 MCL1Q07820 350 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 XKR4Q5GH76 650 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 ANKRD54Q6NXT1 300 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 ALKAL1Q6UXT8 129 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 TAS1R1Q7RTX1 841 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 PDILTQ8N807 584 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
PHGDH-231ENST00000641939 FIZ1Q96SL8 496 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 PAAF1Q9BRP4 392 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 EMILIN2Q9BXX0 1053 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 CACNG4Q9UBN1 327 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 CFAP45Q9UL16 551 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 VWA8A3KMH1 1905 aa16.45■□□□□ 0.22
PHGDH-231ENST00000641939 PLXNA3P51805 1871 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 C2CD2LO14523 706 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 HOXB8P17481 243 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-231ENST00000641939 NMT1P30419 496 aaKnown RBP16.44■□□□□ 0.22
PHGDH-231ENST00000641939 GLUD2P49448 558 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 LIG4P49917 911 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 GTF2BQ00403 316 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 DSG1Q02413 1049 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 KIAA0319Q5VV43 1072 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 KIAA1841Q6NSI8 718 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 PPFIBP1Q86W92 1011 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 SNX27Q96L92 541 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 KLHL5Q96PQ7 755 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 GPR62Q9BZJ7 368 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 CHST7Q9NS84 486 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 SEL1LQ9UBV2 794 aa16.44■□□□□ 0.22
PHGDH-231ENST00000641939 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-231ENST00000641939 SF3B1O75533 1304 aaKnown RBP eCLIP16.44■□□□□ 0.222e-8■■■■■ 95.7
PHGDH-231ENST00000641939 HNRNPDLO14979 420 aaKnown RBP16.43■□□□□ 0.22
PHGDH-231ENST00000641939 PIGRP01833 764 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 CNPP09543 421 aaKnown RBP16.43■□□□□ 0.22
PHGDH-231ENST00000641939 GAP43P17677 238 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 KLRC2P26717 231 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
PHGDH-231ENST00000641939 ZP2Q05996 745 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 TPRNQ4KMQ1 711 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 AXDND1Q5T1B0 1012 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-231ENST00000641939 SYCE2Q6PIF2 218 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 MAP4K3Q8IVH8 894 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 ADHFE1Q8IWW8 467 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 GJD3Q8N144 294 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 HASPINQ8TF76 798 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 SLC22A17Q8WUG5 538 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 UROC1Q96N76 676 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 S1PR5Q9H228 398 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 ST6GALNAC4Q9H4F1 302 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 CD320Q9NPF0 282 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 DZANK1Q9NVP4 752 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 CNTN3Q9P232 1028 aa16.43■□□□□ 0.22
PHGDH-231ENST00000641939 KIF4AO95239 1232 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 KCNE1P15382 129 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 EPCAMP16422 314 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-231ENST00000641939 ME1P48163 572 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 CLCN4P51793 760 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 ZC2HC1CQ53FD0 456 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-231ENST00000641939 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 GPR65Q8IYL9 337 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 SUSD6Q92537 303 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 B3GALT6Q96L58 329 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 POP1Q99575 1024 aaKnown RBP16.42■□□□□ 0.22
PHGDH-231ENST00000641939 CUEDC2Q9H467 287 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 RXFP1Q9HBX9 757 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 SLC38A7Q9NVC3 462 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 PCDHA7Q9UN72 937 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 ANK1P16157 1881 aa16.42■□□□□ 0.22
PHGDH-231ENST00000641939 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 MEFVO15553 781 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 ADH1AP07327 375 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 CLTAP09496 248 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 IDEP14735 1019 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 CLCNKBP51801 687 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 BECN1Q14457 450 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 E2F4Q16254 413 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 KYAT1Q16773 422 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 UPP1Q16831 310 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 SLC10A6Q3KNW5 377 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 RIN2Q8WYP3 895 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 HVCN1Q96D96 273 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms