RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CAPN6Q9Y6Q1 641 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 A0A087WZ62 844 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 ENC1O14682 589 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 TNFAIP3P21580 790 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 PIK3CAP42336 1068 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 CDC42EP1Q00587 391 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF568Q3ZCX4 644 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 TRAPPC11Q7Z392 1133 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 WDR49Q8IV35 697 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 GLYCTKQ8IVS8 523 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF668Q96K58 619 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 FDXACB1Q9BRP7 624 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 AP5M1Q9H0R1 490 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 MINDY3Q9H8M7 445 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 KIF3CO14782 793 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 HLA-DRAP01903 254 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 VTNP04004 478 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 H2AFZP0C0S5 128 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 FCGRTP55899 365 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 WNT7BP56706 349 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 CBX1P83916 185 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 IFI16Q16666 785 aaKnown RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 LMBRD2Q68DH5 695 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 H2AFVQ71UI9 128 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF410Q86VK4 478 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 LNX1Q8TBB1 728 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
PHGDH-216ENST00000641375 AGPAT1Q99943 283 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 PACSIN1Q9BY11 444 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 SALL4Q9UJQ4 1053 aa17.72■□□□□ 0.43
PHGDH-216ENST00000641375 USP8P40818 1118 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 TNFSF9P41273 254 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 SEZ6Q53EL9 994 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 UBXN4Q92575 508 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 KAT5Q92993 513 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 PTPRJQ12913 1337 aa17.71■□□□□ 0.43
PHGDH-216ENST00000641375 B4GALT5O43286 388 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 BUB1O43683 1085 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 TUBB4BP68371 445 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 SRGAP1Q7Z6B7 1085 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 KIAA0319LQ8IZA0 1049 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 LMBR1Q8WVP7 490 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■■■ 90
PHGDH-216ENST00000641375 SETD4Q9NVD3 440 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 A0A0A6YYK5 440 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-216ENST00000641375 PHACTR2O75167 634 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 TADA3O75528 432 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 AKR1A1P14550 325 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 OLIG1Q8TAK6 271 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 KAT2BQ92831 832 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 TATDN2Q93075 761 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 ZIC5Q96T25 663 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 PI4K2AQ9BTU6 479 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 TSKSQ9UJT2 592 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 PCDHGC5Q9Y5F6 944 aa17.7■□□□□ 0.42
PHGDH-216ENST00000641375 VNN1O95497 513 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 PRLRP16471 622 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 POU5F1Q01860 360 aaKnown RBP17.69■□□□□ 0.42
PHGDH-216ENST00000641375 NOGQ13253 232 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 MFSD10Q14728 455 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 LRRN4CLQ8ND94 238 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 EPS8L1Q8TE68 723 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 IMPG2Q9BZV3 1241 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 CDT1Q9H211 546 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 SEPT11Q9NVA2 429 aaKnown RBP17.69■□□□□ 0.42
PHGDH-216ENST00000641375 CYP26A1O43174 497 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 IL18RAPO95256 599 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 MCF2P10911 925 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 CTGFP29279 349 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 PSMC4P43686 418 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 AMHR2Q16671 573 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 KYAT1Q16773 422 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 DUOXA2Q1HG44 320 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 ANKRD7Q92527 254 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 HDAC6Q9UBN7 1215 aa17.69■□□□□ 0.42
PHGDH-216ENST00000641375 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
PHGDH-216ENST00000641375 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-216ENST00000641375 ANK1P16157 1881 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 SMIM35A0A1B0GVV1 85 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 MBLAC1A4D2B0 266 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 ERLIN2O94905 339 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 TBXAS1P24557 533 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 PDE6CP51160 858 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 LACTBP83111 547 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 NCOA4Q13772 614 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 NAA30Q147X3 362 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 ERCC6LQ2NKX8 1250 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms