RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 AADACL2Q6P093 401 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 GADL1Q6ZQY3 521 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 ADAT2Q7Z6V5 191 aaKnown RBP18.33■□□□□ 0.52
PHGDH-211ENST00000641213 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 ZNF564Q8TBZ8 553 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-211ENST00000641213 MORC4Q8TE76 937 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 ZNF653Q96CK0 615 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-211ENST00000641213 FNBP1Q96RU3 617 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 DDNO94850 711 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-211ENST00000641213 CALCAP01258 141 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 C4BPAP04003 597 aaKnown RBP18.32■□□□□ 0.52
PHGDH-211ENST00000641213 TNNI1P19237 187 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 PEX5P50542 639 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
PHGDH-211ENST00000641213 PPP2R5EQ16537 467 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 ZACNQ401N2 412 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 ACAD10Q6JQN1 1059 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 CD302Q8IX05 232 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 CD101Q93033 1021 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 PTPRJQ12913 1337 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 GOLGA6L10A0A0M3HER8 536 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 HLA-DRAP01903 254 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 COPB2P35606 906 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 RFC5P40937 340 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 CLEC16AQ2KHT3 1053 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 TDRD10Q5VZ19 366 aaKnown RBP18.32■□□□□ 0.52
PHGDH-211ENST00000641213 SLFN12LQ6IEE8 588 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 BTBD6Q96KE9 485 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 WNT8AQ9H1J5 351 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 UVRAGQ9P2Y5 699 aa18.32■□□□□ 0.52
PHGDH-211ENST00000641213 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
PHGDH-211ENST00000641213 EDN1P05305 212 aa18.31■□□□□ 0.52
PHGDH-211ENST00000641213 TRIM51Q9BSJ1 452 aa18.31■□□□□ 0.52
PHGDH-211ENST00000641213 TARS2Q9BW92 718 aaKnown RBP18.31■□□□□ 0.52
PHGDH-211ENST00000641213 FAM114A2Q9NRY5 505 aa18.31■□□□□ 0.52
PHGDH-211ENST00000641213 IRF6O14896 467 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 VNN1O95497 513 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 STAT5BP51692 787 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 NEDD9Q14511 834 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 LRRC31Q6UY01 552 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 CPNE8Q86YQ8 564 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 DCPSQ96C86 337 aaKnown RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 R3HDMLQ9H3Y0 253 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 ADARB2Q9NS39 739 aaKnown RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 PLAAQ9Y263 795 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 A0A0B4J269 797 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 LDHAP00338 332 aaKnown RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 FLT3P36888 993 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 HSD17B3P37058 310 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 PIK3CAP42336 1068 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 DR1Q01658 176 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 CAPSQ13938 189 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 FAM160B1Q5W0V3 765 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 LRRC45Q96CN5 670 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 MSTO1Q9BUK6 570 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 DPH5Q9H2P9 285 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 TMEM134Q9H6X4 195 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 ELP3Q9H9T3 547 aa18.3■□□□□ 0.52
PHGDH-211ENST00000641213 RBAKQ9NYW8 714 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-211ENST00000641213 CNMDO75829 334 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 GGPS1O95749 300 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 TGFB3P10600 412 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 UNGP13051 313 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 CTNNA1P35221 906 aaKnown RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 IRX3P78415 501 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 BIRC3Q13489 604 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 UAP1Q16222 522 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 SPOPLQ6IQ16 392 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 SULF1Q8IWU6 871 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 RAB17Q9H0T7 212 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 CNOT8Q9UFF9 292 aaKnown RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 PCDHA3Q9Y5H8 950 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 MGAMO43451 1857 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 ADGRA2Q96PE1 1338 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 SPOPO43791 374 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 MAFO75444 373 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 PYGMP11217 842 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 HSPA6P17066 643 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 CTNNA2P26232 953 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 LY6KQ17RY6 165 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 SEL1L2Q5TEA6 688 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 SEPT1Q8WYJ6 367 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 GLG1Q92896 1179 aa18.29■□□□□ 0.52
PHGDH-211ENST00000641213 ASCC2Q9H1I8 757 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-211ENST00000641213 PCDHB2Q9Y5E7 798 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms