RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PSMC6P62333 389 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 KLHL38Q2WGJ6 581 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 C4orf50Q6ZRC1 276 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 MMGT1Q8N4V1 131 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 CYP2W1Q8TAV3 490 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 PNMA5Q96PV4 448 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 TXLNGQ9NUQ3 528 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 PPP1R9AQ9ULJ8 1098 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 FOXN3O00409 490 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-223ENST00000640640 ATMINO43313 823 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-223ENST00000640640 PHF2O75151 1096 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 CDK17Q00537 523 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 SEPT6Q14141 434 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 EPC2Q52LR7 807 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 DCLK2Q8N568 766 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 NUF2Q9BZD4 464 aa18.63■□□□□ 0.57
SCARB2-223ENST00000640640 MYO1CO00159 1063 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 EXTL3O43909 919 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 RHBDL3P58872 404 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 BEND6Q5SZJ8 279 aaPredicted RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 IER5Q5VY09 327 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 HEATR6Q6AI08 1181 aaKnown RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 GBP7Q8N8V2 638 aaPredicted RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 HDAC11Q96DB2 347 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 THOC1Q96FV9 657 aaKnown RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ZNF560Q96MR9 790 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 SENP7Q9BQF6 1050 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 CBWD1Q9BRT8 395 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 KLHL11Q9NVR0 708 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 MAP3K20Q9NYL2 800 aaKnown RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ARHGAP20Q9P2F6 1191 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 WDR35Q9P2L0 1181 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 FGFR4P22455 802 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 FAM83AQ86UY5 434 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ZC3H18Q86VM9 953 aaKnown RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 THEM5Q8N1Q8 247 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 SH2D3CQ8N5H7 860 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 OR6J1Q8NGC5 347 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 NUDT12Q9BQG2 462 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 FAM237AA0A1B0GTK4 181 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 CREB3O43889 395 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 NOL3O60936 208 aaKnown RBP18.62■□□□□ 0.57
SCARB2-223ENST00000640640 RBP5P82980 135 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 DACT2Q5SW24 774 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ZNF720Q7Z2F6 126 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 SCN4BQ8IWT1 228 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ASAP2O43150 1006 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 SNAPC2Q13487 334 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 TRIM68Q6AZZ1 485 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 SPOPLQ6IQ16 392 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 PPM1NQ8N819 430 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 EHD2Q9NZN4 543 aa18.62■□□□□ 0.57
SCARB2-223ENST00000640640 DYNC1LI2O43237 492 aaPredicted RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 MAP2K2P36507 400 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 MMEL1Q495T6 779 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 ZNF449Q6P9G9 518 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 NUDCD1Q96RS6 583 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 CHORDC1Q9UHD1 332 aaPredicted RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 MAPK13O15264 365 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 GH1P01241 217 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 ROR1Q01973 937 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 ATG16L1Q676U5 607 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 PDCD7Q8N8D1 485 aaKnown RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 ATP11CQ8NB49 1132 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 CARD9Q9H257 536 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 PIN4Q9Y237 131 aaKnown RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 SLC30A10Q6XR72 485 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 OLFML3Q9NRN5 406 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 C3P01024 1663 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 GAKO14976 1311 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 SLC4A1P02730 911 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 TAL1P17542 331 aaPredicted RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 VCAM1P19320 739 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 KPNA2P52292 529 aaKnown RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 TMPRSS15P98073 1019 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 GUCY1A3Q02108 690 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 E2F5Q15329 346 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 E2F4Q16254 413 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 DDX42Q86XP3 938 aaKnown RBP eCLIP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 HNRNPLLQ8WVV9 542 aaKnown RBP18.61■□□□□ 0.57
SCARB2-223ENST00000640640 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 PDCD2LQ9BRP1 358 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 MID2Q9UJV3 735 aa18.61■□□□□ 0.57
SCARB2-223ENST00000640640 PDGFRAP16234 1089 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 BYSLQ13895 437 aaKnown RBP18.6■□□□□ 0.57
SCARB2-223ENST00000640640 ATF7IP2Q5U623 682 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 ZFPM1Q8IX07 1006 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 TPCN2Q8NHX9 752 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 MAML1Q92585 1016 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 THAP2Q9H0W7 228 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 ERAP1Q9NZ08 941 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
SCARB2-223ENST00000640640 FNDC3AQ9Y2H6 1198 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms