RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CSRNP2Q9H175 543 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 VPS11Q9H270 941 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 RBM12Q9NTZ6 932 aaKnown RBP4.28□□□□□ -1.72
ATM-230ENST00000640388 AURKAIP1Q9NWT8 199 aaPredicted RBP4.28□□□□□ -1.72
ATM-230ENST00000640388 TRPS1Q9UHF7 1281 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 SCOCQ9UIL1 159 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 DNM3Q9UQ16 869 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 POLR1AO95602 1720 aaPredicted RBP4.28□□□□□ -1.72
ATM-230ENST00000640388 RAPGEF2Q9Y4G8 1499 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 FHAD1B1AJZ9 1412 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 PTPRGP23470 1445 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 AKNAQ7Z591 1439 aa4.28□□□□□ -1.72
ATM-230ENST00000640388 XDHP47989 1333 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 WASHC2CQ9Y4E1 1318 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 CDK13Q14004 1512 aaKnown RBP4.27□□□□□ -1.73
ATM-230ENST00000640388 TRIM75PA6NK02 468 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 GABRDO14764 452 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 C1SP09871 688 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 HSP90B1P14625 803 aaKnown RBP4.27□□□□□ -1.73
ATM-230ENST00000640388 ECHS1P30084 290 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 MCAMP43121 646 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 PER3P56645 1201 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 DGCR2P98153 550 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 PPP3CAQ08209 521 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 PRAMEF14Q5SWL7 426 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 C1QL3Q5VWW1 255 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 SLC16A11Q8NCK7 471 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 FBXO18Q8NFZ0 1043 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 GPATCH3Q96I76 525 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 SORCS2Q96PQ0 1159 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 UHRF1Q96T88 793 aaPredicted RBP4.27□□□□□ -1.73
ATM-230ENST00000640388 LSM14BQ9BX40 385 aaKnown RBP4.27□□□□□ -1.73
ATM-230ENST00000640388 ZNF341Q9BYN7 854 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 SPON1Q9HCB6 807 aa4.27□□□□□ -1.73
ATM-230ENST00000640388 XIRP1Q702N8 1843 aaKnown RBP4.27□□□□□ -1.73
ATM-230ENST00000640388 PHLPP1O60346 1717 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 KIAA1210Q9ULL0 1709 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ZFYVE16Q7Z3T8 1539 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 MYO3AQ8NEV4 1616 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 SHTN1A0MZ66 631 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 KLRG2A4D1S0 409 aaPredicted RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 KLHL33A6NCF5 533 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 GOLGA6L6A8MZA4 724 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 XPOTO43592 962 aaKnown RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 MFSD14BQ5SR56 506 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ANKS6Q68DC2 871 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 DOK3Q7L591 496 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 PQLC1Q8N2U9 271 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATM-230ENST00000640388 OR7D4Q8NG98 312 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 STON2Q8WXE9 905 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 JADE3Q92613 823 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ZNF503Q96F45 646 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 CEP95Q96GE4 821 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 FUBP3Q96I24 572 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATM-230ENST00000640388 SMAD5Q99717 465 aaKnown RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 PDCD2LQ9BRP1 358 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 CPEB1Q9BZB8 566 aaKnown RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 BCO1Q9HAY6 547 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ZNF277Q9NRM2 450 aaPredicted RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 HOMER2Q9NSB8 354 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 PARPBPQ9NWS1 579 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 NOP58Q9Y2X3 529 aaKnown RBP4.26□□□□□ -1.73
ATM-230ENST00000640388 MRFAP1Q9Y605 127 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 TRAPPC8Q9Y2L5 1435 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ABCA10Q8WWZ4 1543 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 ADGBQ8N7X0 1667 aa4.26□□□□□ -1.73
ATM-230ENST00000640388 TTBK1Q5TCY1 1321 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 PRR5-ARHGAP8B1AHC4 643 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 RTEL1-TNFRSF6BF6WH68 1400 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PCDHGA12O60330 932 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 FAM20BO75063 409 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 NDUFS2O75306 463 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 RBP3P10745 1247 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 C6P13671 934 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 TACR2P21452 398 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PTH1RQ03431 593 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PCBP2Q15366 365 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATM-230ENST00000640388 PTPN21Q16825 1174 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 LSM12Q3MHD2 195 aaKnown RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 FAM135BQ49AJ0 1406 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 DCAF17Q5H9S7 520 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 MIIPQ5JXC2 388 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 GJC2Q5T442 439 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 CRIP3Q6Q6R5 217 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 HTR3DQ70Z44 454 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PNMA8AQ86V59 439 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 TRMT2AQ8IZ69 625 aaKnown RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 OR52N2Q8NGI0 321 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 CACTINQ8WUQ7 758 aaKnown RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 SSH1Q8WYL5 1049 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 DPF2Q92785 391 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 HOXB13Q92826 284 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 UACAQ9BZF9 1416 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 LDAHQ9H6V9 325 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 ZNF703Q9H7S9 590 aaPredicted RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 CEP72Q9P209 647 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 INTUQ9ULD6 942 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms