RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
SCN1B-208ENST00000640135 TRIM54Q9BYV2 358 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 TUBE1Q9UJT0 475 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CAPN11Q9UMQ6 739 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
SCN1B-208ENST00000640135 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 ARHGAP42A6NI28 874 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-208ENST00000640135 MSCO60682 206 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 ODC1P11926 461 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-208ENST00000640135 RAB42Q8N4Z0 105 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 KAZALD1Q96I82 304 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 MOSPD1Q9UJG1 213 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 DDTLA6NHG4 134 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-208ENST00000640135 OGTO15294 1046 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 MSH4O15457 936 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 DPYDQ12882 1025 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 EFHC1Q5JVL4 640 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 PDCD6IPQ8WUM4 868 aaKnown RBP11.68□□□□□ -0.54
SCN1B-208ENST00000640135 CHMP6Q96FZ7 201 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 SIK2Q9H0K1 926 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 MYMKA6NI61 221 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 TPI1P60174 286 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 ROR1Q01973 937 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 TMEM132BQ14DG7 1078 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 PLA2G4FQ68DD2 849 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 DSEQ9UL01 958 aa11.68□□□□□ -0.54
SCN1B-208ENST00000640135 FAM187AA6NFU0 413 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 EGFRP00533 1210 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 SLC2A3P11169 496 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 AKR1A1P14550 325 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 CXCR5P32302 372 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 CDH6P55285 790 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 DDR1Q08345 913 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 TMED2Q15363 201 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 TAF2Q6P1X5 1199 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 RIOX1Q9H6W3 641 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 SH3BP1Q9Y3L3 701 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
SCN1B-208ENST00000640135 RAB27AP51159 221 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 PIGHQ14442 188 aaPredicted RBP11.67□□□□□ -0.54
SCN1B-208ENST00000640135 FRA10AC1Q70Z53 315 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 CFAP36Q96G28 342 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 MTG1Q9BT17 334 aaPredicted RBP11.67□□□□□ -0.54
SCN1B-208ENST00000640135 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 CFAP69A5D8W1 941 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 APOL1O14791 398 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 DDX5P17844 614 aaKnown RBP11.67□□□□□ -0.54
SCN1B-208ENST00000640135 PRAMEP78395 509 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 PPIL2Q13356 520 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 Q4G0T1 1027 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 SDE2Q6IQ49 451 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 RBBP8NLQ8NC74 664 aaPredicted RBP11.67□□□□□ -0.54
SCN1B-208ENST00000640135 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 CPA4Q9UI42 421 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 LCP1P13796 627 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 TTC30AQ86WT1 665 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 TTC8Q8TAM2 541 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 PXMP2Q9NR77 195 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
SCN1B-208ENST00000640135 SNX2O60749 519 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CABYRO75952 493 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CATSPER3Q86XQ3 398 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 DDX27Q96GQ7 796 aaKnown RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 LRGUKQ96M69 825 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 HGSO14964 777 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CYP26A1O43174 497 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TMCC1O94876 653 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 LRG1P02750 347 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 PDGFRAP16234 1089 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 GARTP22102 1010 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 NOP14P78316 857 aaKnown RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 KRT35Q92764 455 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 RNF25Q96BH1 459 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 ZBTB18Q99592 522 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TMEM247A6NEH6 219 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 MTSS1O43312 755 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 NPTXRO95502 500 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 GTF2H1P32780 548 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 PCK1P35558 622 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 GNL1P36915 607 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CASP7P55210 303 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms