RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 CITO14578 2027 aa17.29■□□□□ 0.36
SPIN3-233ENST00000640039 BDP1A6H8Y1 2624 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 A0A0B4J269 797 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 CLTAP09496 248 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 CA8P35219 290 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 CAMK1Q14012 370 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 SEZ6Q53EL9 994 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 TCEAL5Q5H9L2 206 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 GLRA4Q5JXX5 417 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 TMEM173Q86WV6 379 aaPredicted RBP17.28■□□□□ 0.36
SPIN3-233ENST00000640039 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
SPIN3-233ENST00000640039 SNX27Q96L92 541 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 TCF25Q9BQ70 676 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 NGRNQ9NPE2 291 aaKnown RBP17.28■□□□□ 0.36
SPIN3-233ENST00000640039 SLC38A7Q9NVC3 462 aa17.28■□□□□ 0.36
SPIN3-233ENST00000640039 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 ANKRD63C9JTQ0 380 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
SPIN3-233ENST00000640039 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
SPIN3-233ENST00000640039 IRS1P35568 1242 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 KCNA1Q09470 495 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 KANK3Q6NY19 840 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 DDX53Q86TM3 631 aaKnown RBP17.27■□□□□ 0.36
SPIN3-233ENST00000640039 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 HPS3Q969F9 1004 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 FGFBP2Q9BYJ0 223 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
SPIN3-233ENST00000640039 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
SPIN3-233ENST00000640039 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.35
SPIN3-233ENST00000640039 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 SMIM28A0A1B0GU29 152 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 CXCL8P10145 99 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 BMP1P13497 986 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 ERVFC1P60507 584 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 PPP2R3AQ06190 1150 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
SPIN3-233ENST00000640039 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 PPP1R10Q96QC0 940 aaKnown RBP17.26■□□□□ 0.35
SPIN3-233ENST00000640039 PLEKHA5Q9HAU0 1116 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 CNTN3Q9P232 1028 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 AGO2Q9UKV8 859 aaKnown RBP17.26■□□□□ 0.35
SPIN3-233ENST00000640039 STYXL1Q9Y6J8 313 aa17.26■□□□□ 0.35
SPIN3-233ENST00000640039 UBE4BO95155 1302 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TISP43B9A030 160 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 FSCN2O14926 492 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 NCK2O43639 380 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TADA2AO75478 443 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 KCNE1P15382 129 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TNFSF9P41273 254 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TFF2Q03403 129 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 EHHADHQ08426 723 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
SPIN3-233ENST00000640039 SLC10A6Q3KNW5 377 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 XKR4Q5GH76 650 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 ALKAL1Q6UXT8 129 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 GLIS3Q8NEA6 775 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
SPIN3-233ENST00000640039 HLA-CQ95604 372 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 UROC1Q96N76 676 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 CXCL16Q9H2A7 254 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 IGFLR1Q9H665 355 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TLE6Q9H808 572 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 MARCH5Q9NX47 278 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 ADAM28Q9UKQ2 775 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 COG5Q9UP83 839 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
SPIN3-233ENST00000640039 TCF20Q9UGU0 1960 aaKnown RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 GARTP22102 1010 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 PSMD2Q13200 908 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 KMT5BQ4FZB7 885 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 ZBTB41Q5SVQ8 909 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 ARMCX5Q6P1M9 558 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 RBM23Q86U06 439 aaKnown RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 UHRF1Q96T88 793 aaPredicted RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 IKZF4Q9H2S9 585 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 CACNG4Q9UBN1 327 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 HOOK1Q9UJC3 728 aaKnown RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.24■□□□□ 0.35
SPIN3-233ENST00000640039 MYO7AQ13402 2215 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 BRWD1Q9NSI6 2320 aa17.24■□□□□ 0.35
SPIN3-233ENST00000640039 SF3B1O75533 1304 aaKnown RBP eCLIP17.23■□□□□ 0.35
SPIN3-233ENST00000640039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.23■□□□□ 0.35
SPIN3-233ENST00000640039 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms