RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 AP5Z1O43299 807 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 LZTS3O60299 673 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CLDN1O95832 211 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 F12P00748 615 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 SOD2P04179 222 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 UQCRFS1P1P0C7P4 283 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF853P0CG23 659 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF286BP0CG31 522 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 TGFB3P10600 412 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CD99P14209 185 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 ARID4AP29374 1257 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CTHP32929 405 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CSTF2P33240 577 aaKnown RBP eCLIP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 MFSD6LQ8IWD5 586 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 ARL14EPQ8N8R7 260 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 P2RY13Q9BPV8 354 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 GPR88Q9GZN0 384 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CEP126Q9P2H0 1117 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CEP131Q9UPN4 1083 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 HIVEP1P15822 2718 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 ZFHX3Q15911 3703 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 LRRK1Q38SD2 2015 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 SMARCA5O60264 1052 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ALDH1A2O94788 518 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ICAM1P05362 532 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF16P17020 682 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 RASA1P20936 1047 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 DRD1P21728 446 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 P2RY2P41231 377 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 GRK6P43250 576 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ADCY7P51828 1080 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 TUSC1Q2TAM9 212 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 KMT5BQ4FZB7 885 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 HSF5Q4G112 596 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PPP1R26Q5T8A7 1209 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 EGFLAMQ63HQ2 1017 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PPP1R18Q6NYC8 613 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 FBXL19Q6PCT2 694 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 DNAJC14Q6Y2X3 702 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 GDF7Q7Z4P5 450 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 USP33Q8TEY7 942 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 STAG1Q8WVM7 1258 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 MKL1Q969V6 931 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 SGF29Q96ES7 293 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 THSD1Q9NS62 852 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 FBXW11Q9UKB1 542 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ATXN7L1Q9ULK2 861 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 FLNCQ14315 2725 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 NCANO14594 1321 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PALM3A6NDB9 673 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 RRN3P2A6NIE6 340 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF197O14709 1029 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 KLK10O43240 276 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 RFPL3O75679 317 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 NDUFB10O96000 172 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 GNSP15586 552 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 BRD2P25440 801 aaKnown RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 NFKB2Q00653 900 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 GRSF1Q12849 480 aaKnown RBP eCLIP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 DSC3Q14574 896 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 IGFBP7Q16270 282 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM196Q5HYL7 178 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 CELF3Q5SZQ8 465 aaKnown RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 RCSD1Q6JBY9 416 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 HAUS6Q7Z4H7 955 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 RNF168Q8IYW5 571 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-213ENST00000639290 ANKRD44Q8N8A2 993 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 LEMD2Q8NC56 503 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 LMBR1Q8WVP7 490 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 KIFC2Q96AC6 838 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PLA2G2FQ9BZM2 168 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 IFT57Q9NWB7 429 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 AKAP2Q9Y2D5 859 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 PCDHB3Q9Y5E6 796 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 NFASCO94856 1347 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 CACNA1EQ15878 2313 aa4.06□□□□□ -1.76
CCDC7-213ENST00000639290 TRDMT1O14717 391 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 PCDHGA12O60330 932 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 EFEMP2O95967 443 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 LGALS2P05162 132 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ITGB5P18084 799 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 WEE1P30291 646 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 GDI1P31150 447 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 LSSP48449 732 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 KPNA1P52294 538 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 FCHO2Q0JRZ9 810 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 BAATQ14032 418 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 STXBP2Q15833 593 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ARHGAP29Q52LW3 1261 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 WDR44Q5JSH3 913 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 KIAA1614Q5VZ46 1190 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 DCBLD1Q8N8Z6 715 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 FEZF2Q8TBJ5 459 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 CELF4Q9BZC1 486 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 C2orf42Q9NWW7 574 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 LRP2BPQ9P2M1 347 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms