RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 ZACNQ401N2 412 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 CCDC70Q6NSX1 233 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 AENQ8WTP8 325 aaKnown RBP9.62□□□□□ -0.87
NECAP1-217ENST00000639276 LMBR1Q8WVP7 490 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 IFT81Q8WYA0 676 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 ALG3Q92685 438 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 DDX47Q9H0S4 455 aaKnown RBP9.62□□□□□ -0.87
NECAP1-217ENST00000639276 SUCLA2Q9P2R7 463 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-217ENST00000639276 TMEM59LQ9UK28 342 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 AMFRQ9UKV5 643 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 HPCAL4Q9UM19 191 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 NOC2LQ9Y3T9 749 aaKnown RBP9.62□□□□□ -0.87
NECAP1-217ENST00000639276 ALG6Q9Y672 507 aa9.62□□□□□ -0.87
NECAP1-217ENST00000639276 B4GALT5O43286 388 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 MSCO60682 206 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 RTN2O75298 545 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CST3P01034 146 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 FAM153BP0C7A2 387 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 RFC5P40937 340 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 PIK3CAP42336 1068 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CLCN3P51790 818 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 OSTNP61366 133 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 FAM193AP78312 1265 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CLDN10P78369 228 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 SNAPC2Q13487 334 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 FAM153CQ494X1 144 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 KRT35Q92764 455 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 RNF14Q9UBS8 474 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 FAM153AQ9UHL3 310 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 NFU1Q9UMS0 254 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 EVPLQ92817 2033 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CNTNAP2Q9UHC6 1331 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 ZC3H4Q9UPT8 1303 aaKnown RBP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 H0YCG3 227 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 PDHXO00330 501 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CLDN3O15551 220 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 PIGRP01833 764 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 GTF2H1P32780 548 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 GPC5P78333 572 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CDR2Q01850 454 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 MESDQ14696 234 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 LLGL1Q15334 1064 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 ARMCX2Q7L311 632 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 SYCE1Q8N0S2 351 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 ACTRT1Q8TDG2 376 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 SCFD2Q8WU76 684 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 PPP1R13LQ8WUF5 828 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-217ENST00000639276 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 PBKQ96KB5 322 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 NLRP4Q96MN2 994 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 MINDY3Q9H8M7 445 aa9.61□□□□□ -0.87
NECAP1-217ENST00000639276 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 KRIT1O00522 736 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 LGR5O75473 907 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 FGGP02679 453 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 IQCF3P0C7M6 154 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 MCM3P25205 808 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 ADORA2AP29274 412 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 PDE6CP51160 858 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 USP37Q86T82 979 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 CEP120Q8N960 986 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 CASKIN2Q8WXE0 1202 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 TRIM7Q9C029 511 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 MROH8Q9H579 483 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 C1orf112Q9NSG2 853 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 DAAM1Q9Y4D1 1078 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 NUB1Q9Y5A7 615 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 ATP8B3O60423 1300 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 PGRMC1O00264 195 aaKnown RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 SART1O43290 800 aaKnown RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 FAM189A1O60320 539 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 SYF2O95926 243 aaKnown RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 GABPB1Q06547 395 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 EFCAB12Q6NXP0 572 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 PASD1Q8IV76 773 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 FMNL3Q8IVF7 1028 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 ZNF653Q96CK0 615 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 NUP85Q9BW27 656 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 CELF4Q9BZC1 486 aaKnown RBP9.6□□□□□ -0.87
NECAP1-217ENST00000639276 CCDC113Q9H0I3 377 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 KIAA1586Q9HCI6 787 aa9.6□□□□□ -0.87
NECAP1-217ENST00000639276 VPS18Q9P253 973 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms