RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 C11orf16Q9NQ32 467 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 CHST7Q9NS84 486 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 ANKFY1Q9P2R3 1169 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 H0YCG3 227 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 GPR37L1O60883 481 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 PROZP22891 400 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 MTHFRP42898 656 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 TRIP11Q15643 1979 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 TMC5Q6UXY8 1006 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 USP49Q70CQ1 688 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 RIN2Q8WYP3 895 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 LARP4BQ92615 738 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 ZBTB45Q96K62 511 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 PPP1R10Q96QC0 940 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 ZHX3Q9H4I2 956 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 POMKQ9H5K3 350 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 SFXN1Q9H9B4 322 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 RXFP1Q9HBX9 757 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 SRPRBQ9Y5M8 271 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-259ENST00000638114 ABLIM1O14639 778 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 TOM1L1O75674 476 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 GLUD1P00367 558 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 HSP90AA1P07900 732 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 TXLNAP40222 546 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 NCKAP1LP55160 1127 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 ATAT1Q5SQI0 421 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 HAUS6Q7Z4H7 955 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 BICD1Q96G01 975 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 CLIC6Q96NY7 704 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 ACAP3Q96P50 834 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 MAN1C1Q9NR34 630 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 PLXNA3P51805 1871 aa18.35■□□□□ 0.53
CACNA1A-259ENST00000638114 SMIM28A0A1B0GU29 152 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 K7ENM7 598 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 BRD1O95696 1058 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 ELMSAN1Q6PJG2 1045 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 SNX27Q96L92 541 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 GOLGA2P5Q9HBQ8 144 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 NR2E1Q9Y466 385 aa18.34■□□□□ 0.53
CACNA1A-259ENST00000638114 CITO14578 2027 aa18.33■□□□□ 0.53
CACNA1A-259ENST00000638114 CLDN3O15551 220 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 B3GAT3O94766 335 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 MYBP10242 640 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 DDIT3P35638 169 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 CLCNKBP51801 687 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 ZNF131P52739 623 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 CREMQ03060 361 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 ELAVL2Q12926 359 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 RTP2Q5QGT7 225 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 PALB2Q86YC2 1186 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 GPR65Q8IYL9 337 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 FEZF2Q8TBJ5 459 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 UROC1Q96N76 676 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 TTPALQ9BTX7 342 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 FNIP2Q9P278 1114 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 STK17AQ9UEE5 414 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 DPP7Q9UHL4 492 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.52
CACNA1A-259ENST00000638114 TRAK2O60296 914 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 SPATA31D3P0C874 917 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 LIG4P49917 911 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 MCL1Q07820 350 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 SLC39A14Q15043 492 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 RRAGBQ5VZM2 374 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 DCLRE1AQ6PJP8 1040 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 SPATA31D4Q6ZUB0 917 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 GPR149Q86SP6 731 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 KRI1Q8N9T8 703 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 TBX20Q9UMR3 447 aa18.32■□□□□ 0.52
CACNA1A-259ENST00000638114 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 TMEM189-UBE2V1I3L0A0 370 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 HNRNPDLO14979 420 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 TGM5O43548 720 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 SCP2P22307 547 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 SOX4Q06945 474 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms