RNA–Protein interactions for RNA: ENST00000638075.1

EFHC1-238, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-238	ENST00000638075	ASIC4	Q96FT7	647 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	MFSD14A	Q96MC6	490 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	TARS2	Q9BW92	718 aa	Known RBP	11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	MRPL4	Q9BYD3	311 aa	Known RBP	11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	BACH2	Q9BYV9	841 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	CDT1	Q9H211	546 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	PLEKHA4	Q9H4M7	779 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	MAN1C1	Q9NR34	630 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	DENND4A	Q7Z401	1863 aa		11.16	□□□□□ -0.62
EFHC1-238	ENST00000638075	ZDBF2	Q9HCK1	2354 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	SMIM28	A0A1B0GU29	152 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	TMEM189-UBE2V1	I3L0A0	370 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	TGM5	O43548	720 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	BMP15	O95972	392 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	PLA2G4B	P0C869	781 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	SPATA31D3	P0C874	917 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	MCF2	P10911	925 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	IGFBP6	P24592	240 aa	Predicted RBP	11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	CREM	Q03060	361 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	RAD51AP2	Q09MP3	1159 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	UPP1	Q16831	310 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	RTP2	Q5QGT7	225 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	FAM171A1	Q5VUB5	890 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	DCLRE1A	Q6PJP8	1040 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	CD300LG	Q6UXG3	332 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	SPATA31D4	Q6ZUB0	917 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	PALB2	Q86YC2	1186 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	CEP120	Q8N960	986 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	KREMEN2	Q8NCW0	462 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	LNX1	Q8TBB1	728 aa	Predicted RBP	11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	LRRC15	Q8TF66	581 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	HASPIN	Q8TF76	798 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	KCNN1	Q92952	543 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	PBXIP1	Q96AQ6	731 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	CDK5RAP3	Q96JB5	506 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	CLSTN3	Q9BQT9	956 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	TTPAL	Q9BTX7	342 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	KCNH6	Q9H252	994 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	LIMD1	Q9UGP4	676 aa		11.15	□□□□□ -0.62
EFHC1-238	ENST00000638075	VWA8	A3KMH1	1905 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	MAPT	P10636	758 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	KCNE1	P15382	129 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	RPL17	P18621	184 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	PDC	P20941	246 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	LONP1	P36776	959 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	UBA7	P41226	1012 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	CLCNKB	P51801	687 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	SMTN	P53814	917 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	GRIN1	Q05586	938 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ELAVL2	Q12926	359 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	SF3A1	Q15459	793 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZNF568	Q3ZCX4	644 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	GLRA4	Q5JXX5	417 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ELMSAN1	Q6PJG2	1045 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	MPZL3	Q6UWV2	235 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	OTOP3	Q7RTS5	596 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZBTB33	Q86T24	672 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	UBALD2	Q8IYN6	164 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	PIK3R5	Q8WYR1	880 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZNF707	Q96C28	371 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZBTB45	Q96K62	511 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	UROC1	Q96N76	676 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZMAT2	Q96NC0	199 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	ACAP3	Q96P50	834 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	TCHP	Q9BT92	498 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	CCDC94	Q9BW85	323 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	WDR6	Q9NNW5	1121 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	BLOC1S4	Q9NUP1	217 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	LARS	Q9P2J5	1176 aa	Known RBP	11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	SORCS3	Q9UPU3	1222 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	CIT	O14578	2027 aa		11.14	□□□□□ -0.63
EFHC1-238	ENST00000638075	DOCK6	Q96HP0	2047 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	SPDYE4	A6NLX3	237 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	MEFV	O15553	781 aa	Predicted RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	TOM1L1	O75674	476 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	RFPL2	O75678	378 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	B3GAT3	O94766	335 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	SYT1	P21579	422 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	FGFR3	P22607	806 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZNF131	P52739	623 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	YARS	P54577	528 aa	Known RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	OSTN	P61366	133 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	SOX4	Q06945	474 aa	Predicted RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	STRN3	Q13033	797 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	MTMR3	Q13615	1198 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	PTPA	Q15257	358 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	PDXDC1	Q6P996	788 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	ZPBP2	Q6X784	338 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	CCDC149	Q6ZUS6	474 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	CEP57	Q86XR8	500 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	GLYCTK	Q8IVS8	523 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	FBXL6	Q8N531	539 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	TDRD5	Q8NAT2	981 aa	Known RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	ACSF2	Q96CM8	615 aa	Predicted RBP	11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	CALML4	Q96GE6	196 aa		11.13	□□□□□ -0.63
EFHC1-238	ENST00000638075	DDX27	Q96GQ7	796 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms