RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 WDR62O43379 1518 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 MXI1P50539 228 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 YWHAZP63104 245 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 CNGA2Q16280 664 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 ALS2CLQ60I27 953 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 DHX36Q9H2U1 1008 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 KPNA1P52294 538 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 CDC37Q16543 378 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 C6orf10Q5SRN2 563 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 RHBDL2Q9NX52 303 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 GALNT8Q9NY28 637 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 A8MXQ7 604 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 RGS5O15539 181 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 BBOX1O75936 387 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 PDGFRBP09619 1106 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 NR1D1P20393 614 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 S100A5P33763 92 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 EPHB4P54760 987 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 SLFN12LQ6IEE8 588 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 MID2Q9UJV3 735 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 MAGEA9P43362 315 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 SWSAP1Q6NVH7 229 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 OSGEPL1Q9H4B0 414 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 NDOR1Q9UHB4 597 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 PLCG1P19174 1290 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 AKAP5P24588 427 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 PDIK1LQ8N165 341 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 CCT7Q99832 543 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 ECT2Q9H8V3 914 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 MAN1B1Q9UKM7 699 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 ANKRD12Q6UB98 2062 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 RHOBTB1O94844 696 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 TOMM70O94826 608 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 KRT31Q15323 416 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-258ENST00000638029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 TARSL2A2RTX5 802 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 IFNEQ86WN2 208 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 THTPAQ9BU02 230 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SERPINB4P48594 390 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 PCDHA13Q9Y5I0 950 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 TBC1D4O60343 1298 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HIST1H2AGP0C0S8 130 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HIST1H2ADP20671 130 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 CYP2B6P20813 491 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HIST1H2AHQ96KK5 128 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HIST1H2AJQ99878 128 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 H2AFJQ9BTM1 129 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 TDRD3Q9H7E2 651 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 NUP62P37198 522 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 TRIM25Q14258 630 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 LRRC14Q15048 493 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 ICE2Q659A1 982 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HAUS6Q7Z4H7 955 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 GALNT4Q8N4A0 578 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 NFU1Q9UMS0 254 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 CIAO1O76071 339 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SPARCL1Q14515 664 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SEPT2Q15019 361 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 PHACTR4Q8IZ21 702 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 RTKN2Q8IZC4 609 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 GCOM2Q9BZD3 368 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 PARNO95453 639 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 CLUP10909 449 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 CD274Q9NZQ7 290 aa17.18■□□□□ 0.34
CACNA1A-258ENST00000638029 SHROOM2Q13796 1616 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 RNF103O00237 685 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 NUDT14O95848 222 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 GPS1Q13098 491 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 FUT11Q495W5 492 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CAPRIN2Q6IMN6 1127 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 RNF25Q96BH1 459 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 MOV10L1Q9BXT6 1211 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 MRPL39Q9NYK5 338 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 SLC25A24Q6NUK1 477 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 AKAP10O43572 662 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 RGL4Q8IZJ4 473 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms