RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TIPINQ9BVW5 301 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 HAPLN2Q9GZV7 340 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 C17orf75Q9HAS0 396 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 ANKFY1Q9P2R3 1169 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 C2CD4DB7Z1M9 353 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 GRM5P41594 1212 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 HERC4Q5GLZ8 1057 aaPredicted RBP19.44■□□□□ 0.7
PNKP-230ENST00000638016 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 CES5AQ6NT32 575 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 MPZL3Q6UWV2 235 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 CD300LGQ6UXG3 332 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 PALB2Q86YC2 1186 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 C3orf58Q8NDZ4 430 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 ZMAT2Q96NC0 199 aaKnown RBP19.44■□□□□ 0.7
PNKP-230ENST00000638016 NTPCRQ9BSD7 190 aaKnown RBP19.44■□□□□ 0.7
PNKP-230ENST00000638016 RXFP1Q9HBX9 757 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 MAN1C1Q9NR34 630 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 DZANK1Q9NVP4 752 aa19.44■□□□□ 0.7
PNKP-230ENST00000638016 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
PNKP-230ENST00000638016 DOCK6Q96HP0 2047 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 SPDYE4A6NLX3 237 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 CLCNKBP51801 687 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 ITIH3Q06033 890 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 USP41Q3LFD5 358 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
PNKP-230ENST00000638016 PPFIBP1Q86W92 1011 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 CEP57Q86XR8 500 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
PNKP-230ENST00000638016 TCHPQ9BT92 498 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 CCDC94Q9BW85 323 aaPredicted RBP19.43■□□□□ 0.7
PNKP-230ENST00000638016 SFXN1Q9H9B4 322 aa19.43■□□□□ 0.7
PNKP-230ENST00000638016 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
PNKP-230ENST00000638016 SMIM28A0A1B0GU29 152 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 I3L4J1 428 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 STX6O43752 255 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 RFPL2O75678 378 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 ADH1AP07327 375 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 MCF2P10911 925 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 NCKAP1LP55160 1127 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 STRN3Q13033 797 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 FAM171A1Q5VUB5 890 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 ALKAL1Q6UXT8 129 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 KCTD17Q8N5Z5 321 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 SNX27Q96L92 541 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 CCSER1Q9C0I3 900 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 SMOC2Q9H3U7 446 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 KCND2Q9NZV8 630 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 STK39Q9UEW8 545 aa19.42■□□□□ 0.7
PNKP-230ENST00000638016 MTCL1Q9Y4B5 1905 aaKnown RBP19.42■□□□□ 0.7
PNKP-230ENST00000638016 SF3B1O75533 1304 aaKnown RBP eCLIP19.42■□□□□ 0.7
PNKP-230ENST00000638016 K7ENM7 598 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 ADAM12O43184 909 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 TGM5O43548 720 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 FAM13AO94988 1023 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 BRD1O95696 1058 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 GLUD1P00367 558 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 BRCC3P46736 316 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 ZBTB41Q5SVQ8 909 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 HAUS6Q7Z4H7 955 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 GPR149Q86SP6 731 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 MYCT1Q8N699 235 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 LARP4BQ92615 738 aaKnown RBP19.41■□□□□ 0.7
PNKP-230ENST00000638016 C18orf25Q96B23 403 aaPredicted RBP19.41■□□□□ 0.7
PNKP-230ENST00000638016 FIZ1Q96SL8 496 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 IKZF4Q9H2S9 585 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 ODF2LQ9ULJ1 636 aa19.41■□□□□ 0.7
PNKP-230ENST00000638016 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
PNKP-230ENST00000638016 A0A087X0B3 334 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 PRR33A8MZF0 331 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 SLC26A4O43511 780 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 B3GAT3O94766 335 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 KRT18P05783 430 aaKnown RBP19.4■□□□□ 0.7
PNKP-230ENST00000638016 NMT1P30419 496 aaKnown RBP19.4■□□□□ 0.7
PNKP-230ENST00000638016 TNFSF9P41273 254 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 MTHFRP42898 656 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 ZNF131P52739 623 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 SMTNP53814 917 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 YARSP54577 528 aaKnown RBP19.4■□□□□ 0.7
PNKP-230ENST00000638016 SPAG1Q07617 926 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 NOLC1Q14978 699 aaKnown RBP eCLIP19.4■□□□□ 0.7
PNKP-230ENST00000638016 XKR4Q5GH76 650 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 ATAT1Q5SQI0 421 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 HFE2Q6ZVN8 426 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 DYMQ7RTS9 669 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 SNX21Q969T3 373 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 RIPOR3Q96MK2 946 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 NECTIN4Q96NY8 510 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 ACAP3Q96P50 834 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 LARSQ9P2J5 1176 aaKnown RBP19.4■□□□□ 0.7
PNKP-230ENST00000638016 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
PNKP-230ENST00000638016 TISP43B9A030 160 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 TOM1L1O75674 476 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 ASGR2P07307 311 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 CXCL8P10145 99 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 UPP1Q16831 310 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 SLC10A6Q3KNW5 377 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.69
PNKP-230ENST00000638016 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 LNX1Q8TBB1 728 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms