RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 TRIM25Q14258 630 aaKnown RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 FAM47CQ5HY64 1035 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 LCORLQ8N3X6 602 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 TMA16Q96EY4 203 aaKnown RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 KLHL3Q9UH77 587 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 TESPA1A2RU30 521 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 CHN1P15882 459 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 FAM162AQ96A26 154 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 C20orf96Q9NUD7 363 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 ABCC4O15439 1325 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 ATP6V1B1P15313 513 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 HPCAP84074 193 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 COX10Q12887 443 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 PPM1NQ8N819 430 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 CYTH3O43739 400 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 SRP72O76094 671 aaKnown RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 NUP85Q9BW27 656 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 IGF2BP3O00425 579 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 IARS2Q9NSE4 1012 aaKnown RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 STAP1Q9ULZ2 295 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 ACEP12821 1306 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 CCDC195A0A1B0GUA6 201 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 RCAN1P53805 252 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 PDLIM2Q96JY6 352 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 SESN2P58004 480 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 EXOSC4Q9NPD3 245 aaKnown RBP15.86■□□□□ 0.13
UBE3A-227ENST00000638011 RIC8BQ9NVN3 520 aa15.86■□□□□ 0.13
UBE3A-227ENST00000638011 STAP2Q9UGK3 403 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 SHANK2Q9UPX8 1470 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 MYL2P10916 166 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 KCNA2P16389 499 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 PDIA2Q13087 525 aaKnown RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 CCDC59Q9P031 241 aaKnown RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 G3BP2Q9UN86 482 aaKnown RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 PCDHA1Q9Y5I3 950 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 USP19O94966 1318 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 VWA5AO00534 786 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 CNOT3O75175 753 aaKnown RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 FAM200BP0CF97 657 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 TRIP13Q15645 432 aaPredicted RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 RUNDC3AQ59EK9 446 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 CFAP74Q9C0B2 1584 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 GOLGA8SH3BPF8 625 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 SERPINB12Q96P63 405 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 PARVAQ9NVD7 372 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 SLC9A2Q9UBY0 812 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 PCDHB8Q9UN66 801 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 DTNAQ9Y4J8 743 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 STX11O75558 287 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 DCAF15Q66K64 600 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 CCDC60Q8IWA6 550 aaPredicted RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 OR8H2Q8N162 312 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 KIFC1Q9BW19 673 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 IPPQ9Y573 584 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 TNKSO95271 1327 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 ZNF862O60290 1169 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 TTC39BQ5VTQ0 682 aaPredicted RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 STAG2Q8N3U4 1231 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 MYLK2Q9H1R3 596 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 SNX24Q9Y343 169 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 TSNQ15631 228 aaKnown RBP15.85■□□□□ 0.13
UBE3A-227ENST00000638011 TIMMDC1Q9NPL8 285 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 SNX12Q9UMY4 172 aa15.85■□□□□ 0.13
UBE3A-227ENST00000638011 POU5F1BQ06416 359 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 RGS21Q2M5E4 152 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 UNC13DQ70J99 1090 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 LPCAT2Q7L5N7 544 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 DPP10Q8N608 796 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 C6orf203Q9P0P8 240 aaPredicted RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 SYNCRIPO60506 623 aaKnown RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 MAGEA10P43363 369 aaPredicted RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 FNTAP49354 379 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 RAD23AP54725 363 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 UBE3CQ15386 1083 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 DGUOKQ16854 277 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 PRMT9Q6P2P2 845 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 ZBTB38Q8NAP3 1195 aaPredicted RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 ASAP3Q8TDY4 903 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 CCDC17Q96LX7 622 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 HERC5Q9UII4 1024 aaKnown RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 TFAMQ00059 246 aaKnown RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 PUDPQ08623 228 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 KLHL17Q6TDP4 642 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 BDH2Q9BUT1 245 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 RPRD1BQ9NQG5 326 aaKnown RBP15.84■□□□□ 0.13
UBE3A-227ENST00000638011 WDR19Q8NEZ3 1342 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 TRIM66O15016 1216 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 TEX28O15482 410 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 ITGAXP20702 1163 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 IRAK1P51617 712 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 RAB25P57735 213 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 ZNF786Q8N393 782 aa15.84■□□□□ 0.13
UBE3A-227ENST00000638011 CCDC33Q8N5R6 958 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms