RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 M0R296 226 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 KIF4AO95239 1232 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 KRT18P05783 430 aaKnown RBP20.78■□□□□ 0.92
CLN6-221ENST00000637494 MATR3P43243 847 aaKnown RBP eCLIP20.78■□□□□ 0.92
CLN6-221ENST00000637494 OSTNP61366 133 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 SIGLEC14Q08ET2 396 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 FAM171A1Q5VUB5 890 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 MPZL3Q6UWV2 235 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 OTOP3Q7RTS5 596 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 PALB2Q86YC2 1186 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 CMASQ8NFW8 434 aaPredicted RBP20.78■□□□□ 0.92
CLN6-221ENST00000637494 PBXIP1Q96AQ6 731 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 B3GALT6Q96L58 329 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 ACAP3Q96P50 834 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 PAAF1Q9BRP4 392 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 ODF2LQ9ULJ1 636 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 CCDC195A0A1B0GUA6 201 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 TRAPPC3O43617 180 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 HARSP12081 509 aaKnown RBP20.77■□□□□ 0.92
CLN6-221ENST00000637494 PLA2G5P39877 138 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 MTMR3Q13615 1198 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 GLRA4Q5JXX5 417 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 DCLRE1AQ6PJP8 1040 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 HFE2Q6ZVN8 426 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 GPBP1Q86WP2 473 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.92
CLN6-221ENST00000637494 ZDHHC14Q8IZN3 488 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 STAMQ92783 540 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 BICD1Q96G01 975 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 PPP1R10Q96QC0 940 aaKnown RBP20.77■□□□□ 0.92
CLN6-221ENST00000637494 PIDD1Q9HB75 910 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 CACNG4Q9UBN1 327 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 SORCS3Q9UPU3 1222 aa20.77■□□□□ 0.92
CLN6-221ENST00000637494 C5orf42Q9H799 3197 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 TOM1L1O75674 476 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 B3GAT3O94766 335 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 FAM13AO94988 1023 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 SCP2P22307 547 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
CLN6-221ENST00000637494 NAB2Q15742 525 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 PSMD5Q16401 504 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 TAS1R3Q7RTX0 852 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 BMP8AQ7Z5Y6 402 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 UBALD2Q8IYN6 164 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 TMEM161BQ8NDZ6 487 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 PIK3R5Q8WYR1 880 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 DDX27Q96GQ7 796 aaKnown RBP20.76■□□□□ 0.91
CLN6-221ENST00000637494 INTS4Q96HW7 963 aaKnown RBP20.76■□□□□ 0.91
CLN6-221ENST00000637494 PTPRHQ9HD43 1115 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 ANKFY1Q9P2R3 1169 aa20.76■□□□□ 0.91
CLN6-221ENST00000637494 SMIM28A0A1B0GU29 152 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 TMEM189-UBE2V1I3L0A0 370 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 TGM5O43548 720 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 ABCD1P33897 745 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 TXLNAP40222 546 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 NOLC1Q14978 699 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLN6-221ENST00000637494 RTP2Q5QGT7 225 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 PRSS55Q6UWB4 352 aaPredicted RBP20.75■□□□□ 0.91
CLN6-221ENST00000637494 ZPBP2Q6X784 338 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.75■□□□□ 0.91
CLN6-221ENST00000637494 CEP120Q8N960 986 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 KREMEN2Q8NCW0 462 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 KCNH6Q9H252 994 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 ZDHHC7Q9NXF8 308 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 CCDC39Q9UFE4 941 aa20.75■□□□□ 0.91
CLN6-221ENST00000637494 CLDN3O15551 220 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 TBCAO75347 108 aaKnown RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 BRD1O95696 1058 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 SPATA31D3P0C874 917 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 MYBP10242 640 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 RPL17P18621 184 aaKnown RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 PLCG1P19174 1290 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 SYT1P21579 422 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 PROZP22891 400 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 CACNB1Q02641 598 aaPredicted RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 KARSQ15046 597 aaKnown RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 LIN9Q5TKA1 542 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 SPATA31D4Q6ZUB0 917 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 MYCT1Q8N699 235 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 SMG7Q92540 1137 aaKnown RBP20.74■□□□□ 0.91
CLN6-221ENST00000637494 SNX27Q96L92 541 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 REEP2Q9BRK0 252 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 RHOBTB2Q9BYZ6 727 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 CXCL16Q9H2A7 254 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 ZHX3Q9H4I2 956 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 LIMD1Q9UGP4 676 aa20.74■□□□□ 0.91
CLN6-221ENST00000637494 NPHP3-ACAD11A0A0J9YXS1 232 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 K7ELQ4 463 aaPredicted RBP20.73■□□□□ 0.91
CLN6-221ENST00000637494 CLCNKBP51801 687 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 NCKAP1LP55160 1127 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 KYAT1Q16773 422 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 ARSHQ5FYA8 562 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 HAUS6Q7Z4H7 955 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
CLN6-221ENST00000637494 RAD54LQ92698 747 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 PARVGQ9HBI0 331 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 MYH11P35749 1972 aa20.73■□□□□ 0.91
CLN6-221ENST00000637494 K7ENM7 598 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms