RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 BRSK2Q8IWQ3 736 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 URGCPQ8TCY9 931 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 RPS6KC1Q96S38 1066 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 PLEKHA5Q9HAU0 1116 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 TTC26A0AVF1 554 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 PTGESO14684 152 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 ADRB2P07550 413 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 SCNN1GP51170 649 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 STX17P56962 302 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 BTG3Q14201 252 aaPredicted RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 ZSCAN23Q3MJ62 389 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 LRIT3Q3SXY7 679 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 CBWD2Q8IUF1 395 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 ZC3H3Q8IXZ2 948 aaKnown RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 GSTCDQ8NEC7 633 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 DUSP9Q99956 384 aaKnown RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 MIOSQ9NXC5 875 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 RBAKQ9NYW8 714 aaPredicted RBP17.4■□□□□ 0.38
CLN6-216ENST00000636876 CNTN3Q9P232 1028 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 RWDD2AQ9UIY3 292 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 TRIP11Q15643 1979 aa17.4■□□□□ 0.38
CLN6-216ENST00000636876 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.38
CLN6-216ENST00000636876 GBF1Q92538 1859 aa17.39■□□□□ 0.38
CLN6-216ENST00000636876 SYCE3A1L190 88 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 LCHNA4D1U4 455 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 LACTBL1A8MY62 500 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 CETN3O15182 167 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 MYOGP15173 224 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 KCNE1P15382 129 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.37
CLN6-216ENST00000636876 CASP4P49662 377 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 SMAD3P84022 425 aaKnown RBP17.39■□□□□ 0.37
CLN6-216ENST00000636876 FKBP3Q00688 224 aaKnown RBP17.39■□□□□ 0.37
CLN6-216ENST00000636876 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 ADAM9Q13443 819 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 RAB30Q15771 203 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 CD302Q8IX05 232 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 LRRC43Q8N309 656 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 PBX4Q9BYU1 374 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 TBC1D13Q9NVG8 400 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 KANSL3Q9P2N6 904 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.37
CLN6-216ENST00000636876 YBX2Q9Y2T7 364 aaKnown RBP17.39■□□□□ 0.37
CLN6-216ENST00000636876 CHD7Q9P2D1 2997 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 SMIM28A0A1B0GU29 152 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 IL18RAPO95256 599 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 POMCP01189 267 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 PBX2P40425 430 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 RNASELQ05823 741 aaKnown RBP17.38■□□□□ 0.37
CLN6-216ENST00000636876 CYP24A1Q07973 514 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 GRIK3Q13003 919 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
CLN6-216ENST00000636876 FIBCD1Q8N539 461 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 FAM212AQ96EL1 285 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 ZMAT2Q96NC0 199 aaKnown RBP17.38■□□□□ 0.37
CLN6-216ENST00000636876 MED15Q96RN5 788 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 FUCA2Q9BTY2 467 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 ASB7Q9H672 318 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 FRMD4BQ9Y2L6 1034 aa17.38■□□□□ 0.37
CLN6-216ENST00000636876 MAPK13O15264 365 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 AKAP3O75969 853 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 THP07101 528 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 WNT7BP56706 349 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 GLRA4Q5JXX5 417 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 Q7L0L9 218 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 CSGALNACT2Q8N6G5 542 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 EEF2KMTQ96G04 330 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 MFSD14AQ96MC6 490 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
CLN6-216ENST00000636876 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 CWH43Q9H720 699 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 HCSTQ9UBK5 93 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
CLN6-216ENST00000636876 ANK1P16157 1881 aa17.37■□□□□ 0.37
CLN6-216ENST00000636876 PDCD11Q14690 1871 aaKnown RBP17.36■□□□□ 0.37
CLN6-216ENST00000636876 LINC01553A4QN01 128 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 CA3P07451 260 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 DNAJB2P25686 324 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 PSMC2P35998 433 aaKnown RBP17.36■□□□□ 0.37
CLN6-216ENST00000636876 DSC1Q08554 894 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 PSMD6Q15008 389 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 SURF1Q15526 300 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 NAB2Q15742 525 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 JADE1Q6IE81 842 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms