RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CHRNA1P02708 482 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 MCF2P10911 925 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 ZSCAN20P17040 1043 aaPredicted RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 PROZP22891 400 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 RPL13P26373 211 aaKnown RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 LIG4P49917 911 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 NLRP12P59046 1061 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 PAK2Q13177 524 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 PRPF4BQ13523 1007 aaKnown RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 LPIN1Q14693 890 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 AMHR2Q16671 573 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 KNOP1Q1ED39 458 aaKnown RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 PLEKHG4Q58EX7 1191 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 CENPPQ6IPU0 288 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 SLC27A1Q6PCB7 646 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 MAEAQ7L5Y9 396 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 USP37Q86T82 979 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 FAM228AQ86W67 206 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 ADSSL1Q8N142 457 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 WHAMMQ8TF30 809 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 SCFD1Q8WVM8 642 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 STAMQ92783 540 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 WNT8BQ93098 351 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 TSG101Q99816 390 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 BPIFA3Q9BQP9 254 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 MKNK1Q9BUB5 465 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 WNT8AQ9H1J5 351 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 ELAC1Q9H777 363 aaKnown RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 ERVK-5Q9HDB9 667 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 UBN1Q9NPG3 1134 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
UPF3B-205ENST00000636792 TDRD15B5MCY1 1934 aaKnown RBP7.35□□□□□ -1.23
UPF3B-205ENST00000636792 BRCA2P51587 3418 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ANK1P16157 1881 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 TET1Q8NFU7 2136 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 A0A087WWV3 80 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 A0A1B0GUA9 196 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 SPINT1O43278 529 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 TSPAN1O60635 241 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 CTSHP09668 335 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 SRGAP2CP0DJJ0 459 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 GHRP10912 638 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 CCNE1P24864 410 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 NMT1P30419 496 aaKnown RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ZNF445P59923 1031 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 FPGSQ05932 587 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 MCL1Q07820 350 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 STK4Q13043 487 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 PAK1Q13153 545 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 NOLC1Q14978 699 aaKnown RBP eCLIP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 CAMK4Q16566 473 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ZCWPW2Q504Y3 356 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ATF7IP2Q5U623 682 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 PRPF38BQ5VTL8 546 aaKnown RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 MPZL3Q6UWV2 235 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 TAS1R3Q7RTX0 852 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ZC3H3Q8IXZ2 948 aaKnown RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 SYCP3Q8IZU3 236 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 NOC3LQ8WTT2 800 aaKnown RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 BICD1Q96G01 975 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 CEP63Q96MT8 703 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 ACO2Q99798 780 aaKnown RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 KCTD10Q9H3F6 313 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 SLC39A2Q9NP94 309 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 IL23AQ9NPF7 189 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 PRDM5Q9NQX1 630 aaPredicted RBP7.34□□□□□ -1.23
UPF3B-205ENST00000636792 RWDD2AQ9UIY3 292 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 PADI3Q9ULW8 664 aa7.34□□□□□ -1.23
UPF3B-205ENST00000636792 A0A0B4J269 797 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 SLC35F4A4IF30 521 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 TRIM43BA6NCK2 446 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 SFI1A8K8P3 1242 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 IKBKBO14920 756 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 OGTO15294 1046 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 INPPL1O15357 1258 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 SLC16A3O15427 465 aaKnown RBP7.33□□□□□ -1.24
UPF3B-205ENST00000636792 CLDN3O15551 220 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 NBNO60934 754 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 ZNF623O75123 536 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 GNA14O95837 355 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 EOMESO95936 686 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 MYBP10242 640 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 ARF4P18085 180 aaPredicted RBP7.33□□□□□ -1.24
UPF3B-205ENST00000636792 CASP1P29466 404 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 PRCPP42785 496 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 CASP5P51878 434 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 FKBP3Q00688 224 aaKnown RBP7.33□□□□□ -1.24
UPF3B-205ENST00000636792 PPP2R3AQ06190 1150 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 TYRO3Q06418 890 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 IKBKEQ14164 716 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 DSC3Q14574 896 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 MBTPS1Q14703 1052 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 SURF1Q15526 300 aa7.33□□□□□ -1.24
UPF3B-205ENST00000636792 ZSCAN23Q3MJ62 389 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms