RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 LANCL2Q9NS86 450 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TRPM5Q9NZQ8 1165 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 USP35Q9P2H5 1018 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 DPP7Q9UHL4 492 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 WASHC2AQ641Q2 1341 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 LCHNA4D1U4 455 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GRID2IPA4D2P6 1211 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GOLGA8AA7E2F4 631 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AKR1B10O60218 316 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CFBP00751 764 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ALOX15P16050 662 aaPredicted RBP3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CTGFP29279 349 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 USP14P54578 494 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 NHLH2Q02577 135 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MGAT2Q10469 447 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 STAT4Q14765 748 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 PRAMEF14Q5SWL7 426 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ATXN7L2Q5T6C5 722 aaPredicted RBP3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AGAP9Q5VTM2 703 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 OTUD7BQ6GQQ9 843 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 OLFML1Q6UWY5 402 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 NECAB2Q7Z6G3 386 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TRMT2AQ8IZ69 625 aaKnown RBP3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SUPT20HQ8NEM7 779 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MANSC1Q9H8J5 431 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AKIP1Q9NQ31 210 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TMEM140Q9NV12 185 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MCM8Q9UJA3 840 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ATP11BQ9Y2G3 1177 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FPGT-TNNI3KV9GXZ4 949 aa3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 POLR2AP24928 1970 aaKnown RBP3.98□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 COL4A3Q01955 1670 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TRIM75PA6NK02 468 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CXorf49A8MYA2 514 aaPredicted RBP3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 KIAA0355O15063 1070 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 HKR1P10072 659 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ALAS1P13196 640 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GUCY1A2P33402 732 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MCAMP43121 646 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MTNR1BP49286 362 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 KRT85P78386 507 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GUCY1B3Q02153 619 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FAM102AQ5T9C2 384 aaPredicted RBP3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 HECTD2Q5U5R9 776 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GIMAP6Q6P9H5 292 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 Q6YL49 198 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SEM1Q6ZVN7 128 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 RHOT2Q8IXI1 618 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 WDR66Q8TBY9 1149 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MDM1Q8TC05 714 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TSPEARQ8WU66 669 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 HOXB13Q92826 284 aaPredicted RBP3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AHCYL2Q96HN2 611 aaKnown RBP3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ADI1Q9BV57 179 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MLST8Q9BVC4 326 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TMEM74BQ9NUR3 256 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 POGKQ9P215 609 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CENPVL1A0A0U1RR11 272 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PIPSLA2A3N6 862 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ONECUT2O95948 504 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CFIP05156 583 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DDX6P26196 483 aaKnown RBP eCLIP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZEB1P37275 1124 aaPredicted RBP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 WASP42768 502 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ID4P47928 161 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TMPRSS15P98073 1019 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SPDYE7PQ495Y7 208 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MFSD14BQ5SR56 506 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 XYLT1Q86Y38 959 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FAM43AQ8N2R8 423 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 LINC00476Q8WZB0 136 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NELL1Q92832 810 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FUBP3Q96I24 572 aaKnown RBP eCLIP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 BOD1Q96IK1 185 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 UHRF1Q96T88 793 aaPredicted RBP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 BRIP1Q9BX63 1249 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PUS7LQ9H0K6 701 aaKnown RBP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RNPEPQ9H4A4 650 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SERHL2Q9H4I8 314 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PRDM12Q9H4Q4 367 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZNF277Q9NRM2 450 aaPredicted RBP3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZMYM3Q14202 1370 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ATRNL1Q5VV63 1379 aa3.96□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DRGXA6NNA5 263 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 LEFTY2O00292 366 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ADCY6O43306 1168 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NCR1O76036 304 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CDKL5O76039 1030 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FOSP01100 380 aaPredicted RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ATP5JP18859 108 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 GCSHP23434 173 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZFP36P26651 326 aaKnown RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CNGA1P29973 690 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PTPN7P35236 360 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SREBF1P36956 1147 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CLK3P49761 638 aaKnown RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PER3P56645 1201 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms