RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	ABCB5	Q2M3G0	1257 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	METRNL	Q641Q3	311 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	ANKS6	Q68DC2	871 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	RHOU	Q7L0Q8	258 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	MIGA2	Q7L4E1	593 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	PNMA8A	Q86V59	439 aa	Predicted RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857		Q8N1X5	172 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	NRG4	Q8WWG1	115 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	HAS1	Q92839	578 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	SLC2A13	Q96QE2	648 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	KRTAP4-11	Q9BYQ6	195 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	DMRT3	Q9NQL9	472 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	DDX56	Q9NY93	547 aa	Known RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	DNM3	Q9UQ16	869 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	CHST2	Q9Y4C5	530 aa		4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	CFAP20	Q9Y6A4	193 aa	Known RBP	4.04	□□□□□ -1.76
CNOT1-223	ENST00000628857	PNPLA7	Q6ZV29	1317 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	DRGX	A6NNA5	263 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	HTRA2	O43464	458 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	XPOT	O43592	962 aa	Known RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	GPR32	O75388	356 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	POMC	P01189	267 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	AMY1A	P04745	511 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	PDGFRB	P09619	1106 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	SPATA31D3	P0C874	917 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ALAS1	P13196	640 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ZSCAN20	P17040	1043 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ATP5J	P18859	108 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	DDC	P20711	480 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	EDNRB	P24530	442 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	BMPR1A	P36894	532 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	NEK2	P51955	445 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	CTXN1	P60606	82 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	TAP1	Q03518	808 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ACAP2	Q15057	778 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	AFMID	Q63HM1	303 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	SPATA31D4	Q6ZUB0	917 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	GDF7	Q7Z4P5	450 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	XYLT1	Q86Y38	959 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	PLXDC1	Q8IUK5	500 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	RHOT2	Q8IXI1	618 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ULK2	Q8IYT8	1036 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	ZNF276	Q8N554	614 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	REPS2	Q8NFH8	660 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	OR2I1P	Q8NGU4	316 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	SLC35B2	Q8TB61	432 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	MYEOV	Q96EZ4	313 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	PRRX2	Q99811	253 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	MRI1	Q9BV20	369 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	REXO4	Q9GZR2	422 aa	Known RBP	4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	CSRNP2	Q9H175	543 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	SPON1	Q9HCB6	807 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	POGK	Q9P215	609 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	DKK2	Q9UBU2	259 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	INTU	Q9ULD6	942 aa		4.03	□□□□□ -1.76
CNOT1-223	ENST00000628857	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	TMEM200C	A6NKL6	621 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	AHRR	A9YTQ3	701 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	RNASET2	O00584	256 aa	Known RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	SLC16A6	O15403	523 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	SNUPN	O95149	360 aa	Known RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ARIH2	O95376	493 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ITGB1	P05556	798 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	NHLH2	Q02577	135 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ABHD18	Q0P651	414 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ODF1	Q14990	250 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	FNDC7	Q5VTL7	733 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	AGAP9	Q5VTM2	703 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	TTC7B	Q86TV6	843 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	SYT12	Q8IV01	421 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	CMTR2	Q8IYT2	770 aa	Known RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	MIER2	Q8N344	545 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	PRR18	Q8N4B5	295 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	CPA6	Q8N4T0	437 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	PPM1N	Q8N819	430 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	IL17RD	Q8NFM7	739 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	OR10H5	Q8NGA6	315 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ZNF483	Q8TF39	744 aa	Predicted RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	STAG1	Q8WVM7	1258 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	FUBP1	Q96AE4	644 aa	Known RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	MRGPRX4	Q96LA9	322 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	CEP89	Q96ST8	783 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	ZNF341	Q9BYN7	854 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	MAN1C1	Q9NR34	630 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	TDP1	Q9NUW8	608 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	LIMCH1	Q9UPQ0	1083 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	SORCS3	Q9UPU3	1222 aa		4.02	□□□□□ -1.77
CNOT1-223	ENST00000628857	NPIPB8	E9PQR5	432 aa		4.01	□□□□□ -1.77
CNOT1-223	ENST00000628857	SCAF4	O95104	1147 aa	Known RBP	4.01	□□□□□ -1.77
CNOT1-223	ENST00000628857	ZNF202	O95125	648 aa		4.01	□□□□□ -1.77
CNOT1-223	ENST00000628857	HLA-DOA	P06340	250 aa		4.01	□□□□□ -1.77
CNOT1-223	ENST00000628857	LAG3	P18627	525 aa		4.01	□□□□□ -1.77
CNOT1-223	ENST00000628857	GCSH	P23434	173 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms