RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	IFT74	Q96LB3	600 aa		27.83	■■■□□ 2.05
R3HDM4-208	ENST00000626716	FBXW11	Q9UKB1	542 aa		27.83	■■■□□ 2.05
R3HDM4-208	ENST00000626716	TRIP11	Q15643	1979 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	KRBA1	A5PL33	1030 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	EDN1	P05305	212 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	CCT6A	P40227	531 aa	Known RBP	27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PSMD5	Q16401	504 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ECM1	Q16610	540 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	DCAF4L1	Q3SXM0	396 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	EEF1DP3	Q658K8	133 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PDXDC1	Q6P996	788 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	POLD4	Q9HCU8	107 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	GDA	Q9Y2T3	454 aa		27.82	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PRR23A	A6NEV1	266 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ANHX	E9PGG2	379 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	FSHR	P23945	695 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	TRAPPC10	P48553	1259 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	FXR2	P51116	673 aa	Known RBP eCLIP	27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	GNL2	Q13823	731 aa	Known RBP	27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	FRMD5	Q7Z6J6	570 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	C4orf32	Q8N8J7	132 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	KIFAP3	Q92845	792 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	BHMT2	Q9H2M3	363 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	CA14	Q9ULX7	337 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	SPTBN4	Q9H254	2564 aa		27.81	■■■□□ 2.04
R3HDM4-208	ENST00000626716	HNRNPA1	P09651	372 aa	Known RBP eCLIP	27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	NT5DC1	Q5TFE4	455 aa		27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	LIN9	Q5TKA1	542 aa		27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	KIFC3	Q9BVG8	833 aa		27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	LRWD1	Q9UFC0	647 aa		27.8	■■■□□ 2.04
R3HDM4-208	ENST00000626716	VWA8	A3KMH1	1905 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	RFX1	P22670	979 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	HMGN5	P82970	282 aa	Known RBP	27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	HTR4	Q13639	388 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PDIA5	Q14554	519 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ANGPT1	Q15389	498 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PPM1L	Q5SGD2	360 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ATF7IP2	Q5U623	682 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	NKD2	Q969F2	451 aa	Predicted RBP	27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	NOL7	Q9UMY1	257 aa	Known RBP	27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716	KIAA1024	Q9UPX6	916 aa		27.79	■■■□□ 2.04
R3HDM4-208	ENST00000626716		K7ERI5	159 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ADAM12	O43184	909 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	C8A	P07357	584 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	DCLRE1A	Q6PJP8	1040 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	FAM184A	Q8NB25	1140 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	GPR152	Q8TDT2	470 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	STK24	Q9Y6E0	443 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	NUMBL	Q9Y6R0	609 aa		27.78	■■■□□ 2.04
R3HDM4-208	ENST00000626716	TMEM189-UBE2V1	I3L0A0	370 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	B3GAT3	O94766	335 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	HOXA9	P31269	272 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	RAB33A	Q14088	237 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	PPP1R10	Q96QC0	940 aa	Known RBP	27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	TBC1D17	Q9HA65	648 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	DDX19A	Q9NUU7	478 aa	Known RBP	27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	CDH7	Q9ULB5	785 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	WDR87	Q6ZQQ6	2873 aa		27.77	■■■□□ 2.04
R3HDM4-208	ENST00000626716	XYLB	O75191	536 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	FGFR3	P22607	806 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	OR1D2	P34982	312 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	NTHL1	P78549	312 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	NBR1	Q14596	966 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	UVSSA	Q2YD98	709 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PHLDB3	Q6NSJ2	640 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SLC2A4RG	Q9NR83	387 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	POLI	Q9UNA4	740 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	TNFSF13B	Q9Y275	285 aa		27.76	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CCL16	O15467	120 aa		27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	IGFBP6	P24592	240 aa	Predicted RBP	27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CLCNKB	P51801	687 aa		27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GLRA4	Q5JXX5	417 aa		27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ST13P5	Q8NFI4	369 aa	Predicted RBP	27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	UROC1	Q96N76	676 aa		27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	RAB34	Q9BZG1	259 aa		27.75	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CCDC169	A6NNP5	214 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	TRAPPC3	O43617	180 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	U2AF2	P26368	475 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PTGDR	Q13258	359 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	UPP1	Q16831	310 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	RTL10	Q7L3V2	364 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	IGSF22	Q8N9C0	903 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SLC7A14	Q8TBB6	771 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SNX29	Q8TEQ0	813 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	RPP25	Q9BUL9	199 aa	Known RBP	27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ARHGEF3	Q9NR81	526 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	MTRR	Q9UBK8	725 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	DNM3	Q9UQ16	869 aa		27.74	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SMIM28	A0A1B0GU29	152 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	POU2F2	P09086	479 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	TOB1	P50616	345 aa	Predicted RBP	27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PEX3	P56589	373 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PARM1	Q6UWI2	310 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms