RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 CORO1CQ9ULV4 474 aaPredicted RBP12.52□□□□□ -0.41
ATRX-214ENST00000624166 GOLGA8MH3BSY2 632 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 AKR1B1P15121 316 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 FUT2Q10981 343 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 ATP8B4Q8TF62 1192 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 CCT6BQ92526 530 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 NDUFA13Q9P0J0 144 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 XRN1Q8IZH2 1706 aaKnown RBP12.52□□□□□ -0.41
ATRX-214ENST00000624166 ARHGAP23Q9P227 1491 aa12.52□□□□□ -0.41
ATRX-214ENST00000624166 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATRX-214ENST00000624166 CAPN9O14815 690 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 LIN7AO14910 233 aaPredicted RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 PPP4CP60510 307 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CNGA2Q16280 664 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 QPCTQ16769 361 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MTBPQ96DY7 904 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 SMAPO00193 183 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 AKAP3O75969 853 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MMP13P45452 471 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 TFDP2Q14188 446 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CATSPER3Q86XQ3 398 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 OSBPL7Q9BZF2 842 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MST1RQ04912 1400 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MED7O43513 233 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 NTSR2O95665 410 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 ALAS1P13196 640 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 EPHB1P54762 984 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 HIPK4Q8NE63 616 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CEP70Q8NHQ1 597 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 DRC3Q9H069 523 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 IL1RAPL1Q9NZN1 696 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 B2RBV5 119 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 AHCYL1O43865 530 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 P4HBP07237 508 aaKnown RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 KRT7P08729 469 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 PDE1CQ14123 709 aaPredicted RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 CKAP2Q8WWK9 683 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 POLR3CQ9BUI4 534 aaPredicted RBP12.51□□□□□ -0.41
ATRX-214ENST00000624166 KLC2Q9H0B6 622 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 MANSC1Q9H8J5 431 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
ATRX-214ENST00000624166 SLIT3O75094 1523 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 MGRN1O60291 552 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 PSMA2P25787 234 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 CATSPER1Q8NEC5 780 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 HIC2Q96JB3 615 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
ATRX-214ENST00000624166 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 LRRIQ4A6NIV6 560 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 WNT7AO00755 349 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 PAEPP09466 180 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 GIT2Q14161 759 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 TBC1D10BQ4KMP7 808 aaPredicted RBP12.5□□□□□ -0.41
ATRX-214ENST00000624166 RABGAP1LQ5R372 815 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 C4orf32Q8N8J7 132 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 DNM1LO00429 736 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 UNC5CO95185 931 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 ENO1P06733 434 aaKnown RBP12.5□□□□□ -0.41
ATRX-214ENST00000624166 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
ATRX-214ENST00000624166 KCNJ2P63252 427 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 RNF43Q68DV7 783 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 RHPN2Q8IUC4 686 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 LXNQ9BS40 222 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 HAUS8Q9BT25 410 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 NAALADL1Q9UQQ1 740 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 FLT1P17948 1338 aa12.5□□□□□ -0.41
ATRX-214ENST00000624166 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
ATRX-214ENST00000624166 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
ATRX-214ENST00000624166 ZBED1O96006 694 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms