RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 XKR9Q5GH70 373 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 ZNF746Q6NUN9 644 aaPredicted RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 KRT35Q92764 455 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 RAB17Q9H0T7 212 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 PABPC3Q9H361 631 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 SLC38A10Q9HBR0 1119 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 PTPN22Q9Y2R2 807 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 FMO5P49326 533 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 RARRES1P49788 294 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 PGM5Q15124 567 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 LACTB2Q53H82 288 aaPredicted RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 ZDHHC24Q6UX98 284 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 ATXN2LQ8WWM7 1075 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 RFFLQ8WZ73 363 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 BATF3Q9NR55 127 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 ABCF3Q9NUQ8 709 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 LMCD1Q9NZU5 365 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 FRMD4BQ9Y2L6 1034 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 FERP16591 822 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 YWHABP31946 246 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 SOX5P35711 763 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 LAMB3Q13751 1172 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 CPNE8Q86YQ8 564 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 ZDHHC14Q8IZN3 488 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 SLC30A5Q8TAD4 765 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 STAMBPL1Q96FJ0 436 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 RNF146Q9NTX7 359 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 CHCHD3Q9NX63 227 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
PCDHB17P-202ENST00000623466 A0A0A6YYK5 440 aaPredicted RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 P4HBP07237 508 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 GAP43P17677 238 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 RPL21P46778 160 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 PPATQ06203 517 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 ZCWPW1Q9H0M4 648 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 CNOT10Q9H9A5 744 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 EIF4E1BA6NMX2 242 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 FOXN3O00409 490 aaPredicted RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 ATP6V1G2O95670 118 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 KCNJ1P48048 391 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 PHLDB3Q6NSJ2 640 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 NLGN2Q8NFZ4 835 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 RPTORQ8N122 1335 aa14.34□□□□□ -0.11
PCDHB17P-202ENST00000623466 GOLGA6L10A0A0M3HER8 536 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 ANKRD63C9JTQ0 380 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 VWA5AO00534 786 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 WDR46O15213 610 aaKnown RBP14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 MGRN1O60291 552 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 CREB1P16220 341 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 MMP13P45452 471 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 EIF3BP55884 814 aaKnown RBP14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 FKBP1CQ5VVH2 108 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 CCDC63Q8NA47 563 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 SLC20A1Q8WUM9 679 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 ALG6Q9Y672 507 aa14.33□□□□□ -0.11
PCDHB17P-202ENST00000623466 EMSYQ7Z589 1322 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 ZNF541Q9H0D2 1346 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 UPP2O95045 317 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 HOXA7P31268 230 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 MTA1Q13330 715 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 TNIP1Q15025 636 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 BMT2Q1RMZ1 405 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 GNPTABQ3T906 1256 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 TTC27Q6P3X3 843 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 HAUS6Q7Z4H7 955 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 EZH1Q92800 747 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 KIAA1683Q9H0B3 1180 aa14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 METTL14Q9HCE5 456 aaKnown RBP14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 UBE2TQ9NPD8 197 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-202ENST00000623466 ATMINO43313 823 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms