RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 DNAJC9Q8WXX5 260 aa15.06■□□□□ 0
LDB3-209ENST00000623056 SPOCK2Q92563 424 aa15.06■□□□□ 0
LDB3-209ENST00000623056 LENG9Q96B70 501 aa15.06■□□□□ 0
LDB3-209ENST00000623056 P2RX7Q99572 595 aaKnown RBP15.06■□□□□ 0
LDB3-209ENST00000623056 NYXQ9GZU5 481 aa15.06■□□□□ 0
LDB3-209ENST00000623056 GLT8D2Q9H1C3 349 aa15.06■□□□□ 0
LDB3-209ENST00000623056 AGPAT3Q9NRZ7 376 aa15.06■□□□□ 0
LDB3-209ENST00000623056 DMAC2Q9NW81 257 aa15.06■□□□□ 0
LDB3-209ENST00000623056 PHTF1Q9UMS5 762 aa15.06■□□□□ 0
LDB3-209ENST00000623056 BCS1LQ9Y276 419 aa15.06■□□□□ 0
LDB3-209ENST00000623056 ASB3Q9Y575 518 aa15.06■□□□□ 0
LDB3-209ENST00000623056 FAM47DPA6NHR8 397 aa15.06■□□□□ 0
LDB3-209ENST00000623056 FSCN2O14926 492 aa15.06■□□□□ 0
LDB3-209ENST00000623056 MAGEB2O15479 319 aa15.06■□□□□ 0
LDB3-209ENST00000623056 KLC1Q07866 573 aa15.06■□□□□ 0
LDB3-209ENST00000623056 MOGSQ13724 837 aa15.06■□□□□ 0
LDB3-209ENST00000623056 PTK6Q13882 451 aa15.06■□□□□ 0
LDB3-209ENST00000623056 TSNAXIP1Q2TAA8 658 aa15.06■□□□□ 0
LDB3-209ENST00000623056 QRICH1Q2TAL8 776 aa15.06■□□□□ 0
LDB3-209ENST00000623056 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
LDB3-209ENST00000623056 TMEM154Q6P9G4 183 aa15.06■□□□□ 0
LDB3-209ENST00000623056 ZNF449Q6P9G9 518 aa15.06■□□□□ 0
LDB3-209ENST00000623056 HS2ST1Q7LGA3 356 aa15.06■□□□□ 0
LDB3-209ENST00000623056 APLFQ8IW19 511 aaPredicted RBP15.06■□□□□ 0
LDB3-209ENST00000623056 ARHGEF19Q8IW93 802 aa15.06■□□□□ 0
LDB3-209ENST00000623056 ANKRD35Q8N283 1001 aa15.06■□□□□ 0
LDB3-209ENST00000623056 ATG4AQ8WYN0 398 aa15.06■□□□□ 0
LDB3-209ENST00000623056 NUP85Q9BW27 656 aa15.06■□□□□ 0
LDB3-209ENST00000623056 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
LDB3-209ENST00000623056 CHST7Q9NS84 486 aa15.06■□□□□ 0
LDB3-209ENST00000623056 RGL1Q9NZL6 768 aa15.06■□□□□ 0
LDB3-209ENST00000623056 NARFQ9UHQ1 456 aa15.06■□□□□ 0
LDB3-209ENST00000623056 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
LDB3-209ENST00000623056 RASA4BC9J798 803 aa15.05■□□□□ 0
LDB3-209ENST00000623056 RASA4O43374 803 aa15.05■□□□□ 0
LDB3-209ENST00000623056 LMNB2Q03252 620 aa15.05■□□□□ 0
LDB3-209ENST00000623056 BFSP1Q12934 665 aa15.05■□□□□ 0
LDB3-209ENST00000623056 SLC15A2Q16348 729 aa15.05■□□□□ 0
LDB3-209ENST00000623056 Q4G0T1 1027 aa15.05■□□□□ 0
LDB3-209ENST00000623056 PRUNE1Q86TP1 453 aa15.05■□□□□ 0
LDB3-209ENST00000623056 PSPC1Q8WXF1 523 aaKnown RBP15.05■□□□□ 0
LDB3-209ENST00000623056 ARHGEF1Q92888 912 aaKnown RBP15.05■□□□□ 0
LDB3-209ENST00000623056 DENND2DQ9H6A0 471 aaPredicted RBP15.05■□□□□ 0
LDB3-209ENST00000623056 PIDD1Q9HB75 910 aa15.05■□□□□ 0
LDB3-209ENST00000623056 ANAPC5Q9UJX4 755 aa15.05■□□□□ 0
LDB3-209ENST00000623056 VAV3Q9UKW4 847 aa15.05■□□□□ 0
LDB3-209ENST00000623056 MEIS2O14770 477 aa15.05■□□□□ -0
LDB3-209ENST00000623056 ENTPD5O75356 428 aa15.05■□□□□ -0
LDB3-209ENST00000623056 DCTN3O75935 186 aa15.05■□□□□ -0
LDB3-209ENST00000623056 CBX6O95503 412 aa15.05■□□□□ -0
LDB3-209ENST00000623056 ASMTLO95671 621 aa15.05■□□□□ -0
LDB3-209ENST00000623056 ROR2Q01974 943 aaKnown RBP15.05■□□□□ -0
LDB3-209ENST00000623056 GABPAQ06546 454 aa15.05■□□□□ -0
LDB3-209ENST00000623056 TMED2Q15363 201 aa15.05■□□□□ -0
LDB3-209ENST00000623056 RC3H1Q5TC82 1133 aaKnown RBP15.05■□□□□ -0
LDB3-209ENST00000623056 EIF2AK1Q9BQI3 630 aaKnown RBP15.05■□□□□ -0
LDB3-209ENST00000623056 TRAIPQ9BWF2 469 aa15.05■□□□□ -0
LDB3-209ENST00000623056 SLCO1B3Q9NPD5 702 aa15.05■□□□□ -0
LDB3-209ENST00000623056 LRRC4BQ9NT99 713 aa15.05■□□□□ -0
LDB3-209ENST00000623056 EURLQ9NYK6 297 aa15.05■□□□□ -0
LDB3-209ENST00000623056 STK24Q9Y6E0 443 aa15.05■□□□□ -0
LDB3-209ENST00000623056 FAM86B1E9PN63 330 aa15.04■□□□□ -0
LDB3-209ENST00000623056 EML1O00423 815 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SPAG7O75391 227 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SGPL1O95470 568 aa15.04■□□□□ -0
LDB3-209ENST00000623056 FAM86B2P0C5J1 330 aa15.04■□□□□ -0
LDB3-209ENST00000623056 ATF2P15336 505 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SP100P23497 879 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 BRD2P25440 801 aaKnown RBP15.04■□□□□ -0
LDB3-209ENST00000623056 CAV1Q03135 178 aa15.04■□□□□ -0
LDB3-209ENST00000623056 AP3B2Q13367 1082 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SYDE1Q6ZW31 735 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 RDH13Q8NBN7 331 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SH3TC2Q8TF17 1288 aa15.04■□□□□ -0
LDB3-209ENST00000623056 POLR3CQ9BUI4 534 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 PARVGQ9HBI0 331 aa15.04■□□□□ -0
LDB3-209ENST00000623056 USP20Q9Y2K6 914 aa15.04■□□□□ -0
LDB3-209ENST00000623056 A0A1W2PRG0 241 aa15.04■□□□□ -0
LDB3-209ENST00000623056 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 MSH4O15457 936 aa15.04■□□□□ -0
LDB3-209ENST00000623056 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 SORBS3O60504 671 aa15.04■□□□□ -0
LDB3-209ENST00000623056 CYP1A2P05177 515 aa15.04■□□□□ -0
LDB3-209ENST00000623056 CNGA1P29973 690 aa15.04■□□□□ -0
LDB3-209ENST00000623056 ALDH3A1P30838 453 aa15.04■□□□□ -0
LDB3-209ENST00000623056 VPS41P49754 854 aa15.04■□□□□ -0
LDB3-209ENST00000623056 PICALMQ13492 652 aa15.04■□□□□ -0
LDB3-209ENST00000623056 STAT4Q14765 748 aa15.04■□□□□ -0
LDB3-209ENST00000623056 MUM1Q2TAK8 710 aa15.04■□□□□ -0
LDB3-209ENST00000623056 RBM26Q5T8P6 1007 aaKnown RBP15.04■□□□□ -0
LDB3-209ENST00000623056 NSMFQ6X4W1 530 aa15.04■□□□□ -0
LDB3-209ENST00000623056 KIAA0825Q8IV33 1275 aa15.04■□□□□ -0
LDB3-209ENST00000623056 RBBP8NLQ8NC74 664 aaPredicted RBP15.04■□□□□ -0
LDB3-209ENST00000623056 MAML1Q92585 1016 aa15.04■□□□□ -0
LDB3-209ENST00000623056 C9orf72Q96LT7 481 aa15.04■□□□□ -0
LDB3-209ENST00000623056 FAM20AQ96MK3 541 aa15.04■□□□□ -0
LDB3-209ENST00000623056 FIZ1Q96SL8 496 aa15.04■□□□□ -0
LDB3-209ENST00000623056 SETDB2Q96T68 719 aa15.04■□□□□ -0
LDB3-209ENST00000623056 CCDC77Q9BR77 488 aa15.04■□□□□ -0
LDB3-209ENST00000623056 C2CD2Q9Y426 696 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms