RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 GRASPQ7Z6J2 395 aaPredicted RBP26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ADSSL1Q8N142 457 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ST13P5Q8NFI4 369 aaPredicted RBP26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ERMNQ8TAM6 284 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 DEPTORQ8TB45 409 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 NUMBLQ9Y6R0 609 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 OR52Z1P0C646 297 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 PPM1LQ5SGD2 360 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 PHLDB3Q6NSJ2 640 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 ARHGEF3Q9NR81 526 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 SLC2A4RGQ9NR83 387 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 CACNA1IQ9P0X4 2223 aa26.23■■□□□ 1.79
CPSF1-214ENST00000622776 ADAM12O43184 909 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 EDN1P05305 212 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 C8AP07357 584 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 NTHL1P78549 312 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 PPP2R5AQ15172 486 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 ZNF174Q15697 407 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 PDXDC1Q6P996 788 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 CDH7Q9ULB5 785 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 GDAQ9Y2T3 454 aa26.22■■□□□ 1.79
CPSF1-214ENST00000622776 HOXA9P31269 272 aa26.21■■□□□ 1.79
CPSF1-214ENST00000622776 ORC2Q13416 577 aaPredicted RBP26.21■■□□□ 1.79
CPSF1-214ENST00000622776 RPP25Q9BUL9 199 aaKnown RBP26.21■■□□□ 1.79
CPSF1-214ENST00000622776 CCL16O15467 120 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 DCAF4L1Q3SXM0 396 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 DCLRE1AQ6PJP8 1040 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.2■■□□□ 1.78
CPSF1-214ENST00000622776 FGF14Q92915 247 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 KIFC3Q9BVG8 833 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 POLD4Q9HCU8 107 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 SIT1Q9Y3P8 196 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 OTOGLQ3ZCN5 2332 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 VWA8A3KMH1 1905 aa26.2■■□□□ 1.78
CPSF1-214ENST00000622776 XYLBO75191 536 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 DCNP07585 359 aaKnown RBP26.19■■□□□ 1.78
CPSF1-214ENST00000622776 MUTP22033 750 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 EFNA5P52803 228 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 RAB33AQ14088 237 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 SPECC1Q5M775 1068 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 PARM1Q6UWI2 310 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 C8orf76Q96K31 380 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 IFT74Q96LB3 600 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 DLGAP2Q9P1A6 1054 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 POLIQ9UNA4 740 aa26.19■■□□□ 1.78
CPSF1-214ENST00000622776 GPR179Q6PRD1 2367 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 TMEM189-UBE2V1I3L0A0 370 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 FGFR3P22607 806 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 IGFBP6P24592 240 aaPredicted RBP26.18■■□□□ 1.78
CPSF1-214ENST00000622776 OR1D2P34982 312 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 RBM25P49756 843 aaKnown RBP26.18■■□□□ 1.78
CPSF1-214ENST00000622776 GPC5P78333 572 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 FOXK2Q01167 660 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 GLRA4Q5JXX5 417 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 NT5DC1Q5TFE4 455 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 HAUS3Q68CZ6 603 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 SLC7A14Q8TBB6 771 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 FGF13Q92913 245 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 FOXP1Q9H334 677 aaPredicted RBP26.18■■□□□ 1.78
CPSF1-214ENST00000622776 SEMA4AQ9H3S1 761 aa26.18■■□□□ 1.78
CPSF1-214ENST00000622776 DAXXQ9UER7 740 aaPredicted RBP26.18■■□□□ 1.78
CPSF1-214ENST00000622776 TRIP11Q15643 1979 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 B3GAT3O94766 335 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 NEFLP07196 543 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 CCT6AP40227 531 aaKnown RBP26.17■■□□□ 1.78
CPSF1-214ENST00000622776 ECM1Q16610 540 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 UVSSAQ2YD98 709 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 TTC38Q5R3I4 469 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 AXDND1Q5T1B0 1012 aaPredicted RBP26.17■■□□□ 1.78
CPSF1-214ENST00000622776 ATF7IP2Q5U623 682 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 MTSS1LQ765P7 747 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 ITFG1Q8TB96 612 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 KIFAP3Q92845 792 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 PPP1R10Q96QC0 940 aaKnown RBP26.17■■□□□ 1.78
CPSF1-214ENST00000622776 BHMT2Q9H2M3 363 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 MTRRQ9UBK8 725 aa26.17■■□□□ 1.78
CPSF1-214ENST00000622776 CACNA1AO00555 2505 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 POU2F2P09086 479 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 STARD6P59095 220 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 CCDC83Q8IWF9 413 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 KCNG4Q8TDN1 519 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 SHDQ96IW2 340 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 FOXQ1Q9C009 403 aa26.16■■□□□ 1.78
CPSF1-214ENST00000622776 CEP250Q9BV73 2442 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 LMNAP02545 664 aaKnown RBP26.15■■□□□ 1.78
CPSF1-214ENST00000622776 FXR2P51116 673 aaKnown RBP eCLIP26.15■■□□□ 1.782e-6■■■□□ 15.1
CPSF1-214ENST00000622776 CLCNKBP51801 687 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 CD300LGQ6UXG3 332 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 RSPO2Q6UXX9 243 aaPredicted RBP26.15■■□□□ 1.78
CPSF1-214ENST00000622776 APBB1IPQ7Z5R6 666 aaPredicted RBP26.15■■□□□ 1.78
CPSF1-214ENST00000622776 PJA1Q8NG27 643 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 LIMCH1Q9UPQ0 1083 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 R4GN57 208 aa26.15■■□□□ 1.78
CPSF1-214ENST00000622776 MYH15Q9Y2K3 1946 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 NOTCH4Q99466 2003 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 K7ERI5 159 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 UPP1Q16831 310 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 RTL10Q7L3V2 364 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 C1orf210Q8IVY1 113 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 C4orf32Q8N8J7 132 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms