RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TMBIM4Q9HC24 238 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 R3HDM2Q9Y2K5 976 aaKnown RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 A0A0J9YVX5 310 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 SLITRK3O94933 977 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 GH2P01242 217 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 RARAP10276 462 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 PSMC2P35998 433 aaKnown RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 SERPINB4P48594 390 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 CD97P48960 835 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 PSMD7P51665 324 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
LITAF-221ENST00000622633 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 IRGCQ6NXR0 463 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 NT5DC3Q86UY8 548 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 USP33Q8TEY7 942 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 FAM192AQ9GZU8 254 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 OSGEPQ9NPF4 335 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 CNOT8Q9UFF9 292 aaKnown RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 A0A1W2PRG0 241 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 GAP43P17677 238 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 FLT3P36888 993 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 CCNFP41002 786 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 MSH2P43246 934 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 UBXN2AP68543 259 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 CUL1Q13616 776 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
LITAF-221ENST00000622633 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
LITAF-221ENST00000622633 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 DEPTORQ8TB45 409 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
LITAF-221ENST00000622633 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 ETNK2Q9NVF9 386 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 ZNF180Q9UJW8 692 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 AFF2P51816 1311 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 ZMYM2Q9UBW7 1377 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 EP400Q96L91 3159 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 IGLV3-22A0A075B6J6 115 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
LITAF-221ENST00000622633 DAPK3O43293 454 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 LDHAP00338 332 aaKnown RBP13.28□□□□□ -0.28
LITAF-221ENST00000622633 ANXA13P27216 316 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 SOX5P35711 763 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 CYP2J2P51589 502 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 OLIG1Q8TAK6 271 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 RSPH1Q8WYR4 309 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 CENPOQ9BU64 300 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 SCOCQ9UIL1 159 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 DNAJC12Q9UKB3 198 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 TIMM22Q9Y584 194 aa13.28□□□□□ -0.28
LITAF-221ENST00000622633 A0A0A6YYK5 440 aaPredicted RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 H0YGN5 161 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 HIP1RO75146 1068 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CFBP00751 764 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CYP3A4P08684 503 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 PDGFRBP09619 1106 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 MYCLP1P12525 358 aaPredicted RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 ABCB4P21439 1286 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 ATP11AP98196 1134 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 SLC35G2Q8TBE7 412 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 HIC2Q96JB3 615 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 TDRD3Q9H7E2 651 aaKnown RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 RABL2AQ9UBK7 228 aaPredicted RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 AMFRQ9UKV5 643 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 PPP1R9AQ9ULJ8 1098 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 NFS1Q9Y697 457 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 TTI1O43156 1089 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 TIMM44O43615 452 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 TRIM49P0CI25 452 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 TRIM49CP0CI26 452 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 FMO5P49326 533 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 FOXD4Q12950 439 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms