RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 C19orf48Q6RUI8 117 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 IRF7Q92985 503 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 BBC3Q96PG8 261 aaPredicted RBP16.26■□□□□ 0.19
SNX12-206ENST00000622259 EDEM2Q9BV94 578 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 ZFP14Q9HCL3 533 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 TRPV5Q9NQA5 729 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
SNX12-206ENST00000622259 SF3B1O75533 1304 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNX12-206ENST00000622259 PDCD11Q14690 1871 aaKnown RBP16.25■□□□□ 0.19
SNX12-206ENST00000622259 ARNTLO00327 626 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 MSH4O15457 936 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 SRGAP2CP0DJJ0 459 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 AKAP5P24588 427 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 HOXA6P31267 233 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 CCR2P41597 374 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 FUT2Q10981 343 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 UVSSAQ2YD98 709 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 XKR3Q5GH77 459 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 PRSS36Q5K4E3 855 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 FAM171A1Q5VUB5 890 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 TXNDC11Q6PKC3 985 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 CNNM3Q8NE01 707 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 GAB3Q8WWW8 586 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 KIF12Q96FN5 646 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 ZSWIM3Q96MP5 696 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 VPS45Q9NRW7 570 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 EML5Q05BV3 1969 aa16.25■□□□□ 0.19
SNX12-206ENST00000622259 NAV2Q8IVL1 2488 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 HYAL3O43820 417 aaPredicted RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 RPP40O75818 363 aaKnown RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 KIF4AO95239 1232 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 OR1D2P34982 312 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 VIPR2P41587 438 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 RAB33AQ14088 237 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 HSP90AA2PQ14568 343 aaPredicted RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 PLA2G4FQ68DD2 849 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 ASB16Q96NS5 453 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 AVENQ9NQS1 362 aaPredicted RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 KLK14Q9P0G3 267 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 GIT1Q9Y2X7 761 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 GPSM3Q9Y4H4 160 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 PCDHGA5Q9Y5G8 931 aa16.24■□□□□ 0.19
SNX12-206ENST00000622259 V9GY48 417 aaPredicted RBP16.24■□□□□ 0.19
SNX12-206ENST00000622259 CACNA1EQ15878 2313 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 EXTL3O43909 919 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 TSPAN1O60635 241 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 CAPNS1P04632 268 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 PSMC3P17980 439 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 CIITAP33076 1130 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 HDAC1Q13547 482 aaPredicted RBP16.23■□□□□ 0.19
SNX12-206ENST00000622259 LRRC32Q14392 662 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 PKN3Q6P5Z2 889 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 ANO5Q75V66 913 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 PDZD3Q86UT5 571 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 PRPF31Q8WWY3 499 aaKnown RBP16.23■□□□□ 0.19
SNX12-206ENST00000622259 TMEM143Q96AN5 459 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 KLK13Q9UKR3 277 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
SNX12-206ENST00000622259 WDR27A2RRH5 827 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 SLC38A8A6NNN8 435 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 DDX11L8A8MPP1 907 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 IGFBP6P24592 240 aaPredicted RBP16.22■□□□□ 0.19
SNX12-206ENST00000622259 SFNP31947 248 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 LIFRP42702 1097 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 JAK3P52333 1124 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 NPEPPSP55786 919 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 TMTC2Q8N394 836 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 MTA3Q9BTC8 594 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 NEUROG3Q9Y4Z2 214 aa16.22■□□□□ 0.19
SNX12-206ENST00000622259 ASCC3Q8N3C0 2202 aaKnown RBP16.22■□□□□ 0.19
SNX12-206ENST00000622259 CASTOR2A6NHX0 329 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 ZNF263O14978 683 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 CEACAM1P13688 526 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 LAMTOR4Q0VGL1 99 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 GRIK3Q13003 919 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 PLK5Q496M5 336 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 SLC5A5Q92911 643 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 RSPRY1Q96DX4 576 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 ZC3H10Q96K80 434 aaKnown RBP16.21■□□□□ 0.19
SNX12-206ENST00000622259 CORO1BQ9BR76 489 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 CSRNP2Q9H175 543 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
SNX12-206ENST00000622259 MSRB2Q9Y3D2 182 aa16.21■□□□□ 0.19
SNX12-206ENST00000622259 LNP1A1A4G5 178 aa16.2■□□□□ 0.18
SNX12-206ENST00000622259 GAS7O60861 476 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms