RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 AJAP1Q9UKB5 411 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-229ENST00000621897 DNM3Q9UQ16 869 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 CADPSQ9ULU8 1353 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 RNASET2O00584 256 aaKnown RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 NDUFA10O95299 355 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 SNRPA1P09661 255 aaKnown RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 RAP2AP10114 183 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 MGAT1P26572 445 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 PCSK1P29120 753 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 CDKN1CP49918 316 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 FSTL1Q12841 308 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 BEAN1Q3B7T3 259 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 LY6G5CQ5SRR4 150 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 LAIR1Q6GTX8 287 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 FAM180AQ6UWF9 173 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 NECAB2Q7Z6G3 386 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 SENP6Q9GZR1 1112 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 PUS7LQ9H0K6 701 aaKnown RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 ANKFY1Q9P2R3 1169 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 ZBTB21Q9ULJ3 1066 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 USP15Q9Y4E8 981 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-229ENST00000621897 DMRT1Q9Y5R6 373 aa6.02□□□□□ -1.45
BRCA1-229ENST00000621897 GRID2IPA4D2P6 1211 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 TRIM75PA6NK02 468 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 TMEM200CA6NKL6 621 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 DIRC3C9JPN6 131 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 RAMP2O60895 175 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 MT-CO1P00395 513 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 COL10A1Q03692 680 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 PTPAQ15257 358 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 PLXDC1Q8IUK5 500 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 PPM1NQ8N819 430 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.01□□□□□ -1.45
BRCA1-229ENST00000621897 NRG4Q8WWG1 115 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 DPF2Q92785 391 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 ADAM2Q99965 735 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 MYOCQ99972 504 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 SLC23A1Q9UHI7 598 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 MAP3K2Q9Y2U5 619 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 ACTL7AQ9Y615 435 aa6.01□□□□□ -1.45
BRCA1-229ENST00000621897 GAGE12BA1L429 117 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 GAGE12HA6NDE8 117 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 ENDOD1O94919 500 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 AMY1AP04745 511 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 IL2RBP14784 551 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 AMPD3Q01432 767 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 CLUL1Q15846 466 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 RRP12Q5JTH9 1297 aaKnown RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 GJC2Q5T442 439 aaPredicted RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 RNF187Q5TA31 235 aaPredicted RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 AGAP9Q5VTM2 703 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 AMOTL1Q8IY63 956 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 ZGPATQ8N5A5 531 aaKnown RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 CPEB3Q8NE35 698 aaKnown RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 C1orf162Q8NEQ5 155 aaPredicted RBP6□□□□□ -1.45
BRCA1-229ENST00000621897 JADE3Q92613 823 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 TUBD1Q9UJT1 453 aa6□□□□□ -1.45
BRCA1-229ENST00000621897 COL4A3Q01955 1670 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 CCDC78A2IDD5 438 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 TMEM191CA6NGB0 347 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 UNC119BA6NIH7 251 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 MARCH11A6NNE9 402 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 PRSS23O95084 383 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 ELANEP08246 267 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 ATP5JP18859 108 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 PROZP22891 400 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 SLC6A2P23975 617 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 MTMR1Q13613 665 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 ABCB5Q2M3G0 1257 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 PGM2L1Q6PCE3 622 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 MED25Q71SY5 747 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 OR56A1Q8NGH5 318 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 CCHCR1Q8TD31 782 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 CASKIN2Q8WXE0 1202 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 RAB24Q969Q5 203 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 WDR11Q9BZH6 1224 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 CCDC8Q9H0W5 538 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-229ENST00000621897 SERHL2Q9H4I8 314 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 KLHL11Q9NVR0 708 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 FBXO34Q9NWN3 711 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 MOCS1Q9NZB8 636 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 C11orf21Q9P2W6 132 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 TRHDEQ9UKU6 1024 aa5.99□□□□□ -1.45
BRCA1-229ENST00000621897 RUVBL1Q9Y265 456 aaKnown RBP5.99□□□□□ -1.45
BRCA1-229ENST00000621897 FAM171A2A8MVW0 826 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA12O60330 932 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PPFIA4O75335 1185 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 GPR32O75388 356 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 SPATA31D3P0C874 917 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
BRCA1-229ENST00000621897 C5AR1P21730 350 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 ZEB1P37275 1124 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-229ENST00000621897 EVA1CP58658 441 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 ATP8B2P98198 1209 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 MTM1Q13496 603 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 FAM50AQ14320 339 aaKnown RBP5.98□□□□□ -1.45
BRCA1-229ENST00000621897 OTUD7BQ6GQQ9 843 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 ZNF529Q6P280 563 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 Q6YL49 198 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms