RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 OSTNP61366 133 aa19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 USP41Q3LFD5 358 aa19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 HERC4Q5GLZ8 1057 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 ALKAL1Q6UXT8 129 aa19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 RAD54LQ92698 747 aa19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 PPP1R10Q96QC0 940 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 TCHPQ9BT92 498 aa19.69■□□□□ 0.74
SCAMP4-213ENST00000621748 STX6O43752 255 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 ADH1AP07327 375 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 MCF2P10911 925 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 SP100P23497 879 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 IGFBP6P24592 240 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 NCKAP1LP55160 1127 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 STRN3Q13033 797 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 XKR4Q5GH76 650 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 MPZL3Q6UWV2 235 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 TMC5Q6UXY8 1006 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 RASSF8Q8NHQ8 419 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 CLIC6Q96NY7 704 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 USP28Q96RU2 1077 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 CCDC94Q9BW85 323 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 LARSQ9P2J5 1176 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 ODF2LQ9ULJ1 636 aa19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 SRPRBQ9Y5M8 271 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 SF3B1O75533 1304 aaKnown RBP eCLIP19.68■□□□□ 0.749e-6■■■■■ 68.9
SCAMP4-213ENST00000621748 MTCL1Q9Y4B5 1905 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-213ENST00000621748 TECTAO75443 2155 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 VWA8A3KMH1 1905 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 C2orf16Q68DN1 1984 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 SMIM28A0A1B0GU29 152 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 BRD1O95696 1058 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 HARSP12081 509 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 DDIT3P35638 169 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 MTHFRP42898 656 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 RTP2Q5QGT7 225 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 NECTIN4Q96NY8 510 aa19.67■□□□□ 0.74
SCAMP4-213ENST00000621748 MEFVO15553 781 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 TOM1L1O75674 476 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 MYBP10242 640 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 RPL17P18621 184 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ZNF131P52739 623 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 YARSP54577 528 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ATAT1Q5SQI0 421 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 FAM171A1Q5VUB5 890 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 PRSS55Q6UWB4 352 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ZPBP2Q6X784 338 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 HAUS6Q7Z4H7 955 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 PALB2Q86YC2 1186 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 MYCT1Q8N699 235 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 LARP4BQ92615 738 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 RIPOR3Q96MK2 946 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ZMAT2Q96NC0 199 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ACAP3Q96P50 834 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 IPO9Q96P70 1041 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 ZSCAN16Q9H4T2 348 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 SFXN1Q9H9B4 322 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 GOLGA2P5Q9HBQ8 144 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 MAN1C1Q9NR34 630 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 TOPORSQ9NS56 1045 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 FNIP2Q9P278 1114 aa19.66■□□□□ 0.74
SCAMP4-213ENST00000621748 SPDYE4A6NLX3 237 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 FAM13AO94988 1023 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 GLUD1P00367 558 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 SPATA31D3P0C874 917 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 CLCNKBP51801 687 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 SOX4Q06945 474 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 SLC39A14Q15043 492 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 CD300LGQ6UXG3 332 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 SPATA31D4Q6ZUB0 917 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 GPR149Q86SP6 731 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 GLYCTKQ8IVS8 523 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 KCNN1Q92952 543 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 SNX27Q96L92 541 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 TTPALQ9BTX7 342 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 HAPLN2Q9GZV7 340 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 PARVGQ9HBI0 331 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 ANKFY1Q9P2R3 1169 aa19.65■□□□□ 0.74
SCAMP4-213ENST00000621748 PRR33A8MZF0 331 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 C2CD4DB7Z1M9 353 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 TMEM189-UBE2V1I3L0A0 370 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 B3GAT3O94766 335 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 KRT18P05783 430 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 MCL1Q07820 350 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 NOLC1Q14978 699 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 UPP1Q16831 310 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 LILRA6Q6PI73 481 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 DCLRE1AQ6PJP8 1040 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 CEP57Q86XR8 500 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 LNX1Q8TBB1 728 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 EDAQ92838 391 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 FIZ1Q96SL8 496 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 TBX20Q9UMR3 447 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 NR2E1Q9Y466 385 aa19.64■□□□□ 0.73
SCAMP4-213ENST00000621748 MYH15Q9Y2K3 1946 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 PDCD11Q14690 1871 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms