RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 RASGRF2O14827 1237 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 PRPF4O43172 522 aaKnown RBP eCLIP10.36□□□□□ -0.751e-9■■■■■ 32.7
CLTCL1-211ENST00000621271 MAP3K13O43283 966 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 HSPA4LO95757 839 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 ALS2CLQ60I27 953 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 PCDHB12Q9Y5F1 795 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 IQGAP1P46940 1657 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 TBX3O15119 743 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 NDUFA10O95299 355 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 FGGP02679 453 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 PLS3P13797 630 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 MAP4P27816 1152 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 CAP2P40123 477 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 ACOT2P49753 483 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 MUM1Q2TAK8 710 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 PAN2Q504Q3 1202 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 ADCK2Q7Z695 626 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 DDX56Q9NY93 547 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 VWDEQ8N2E2 1590 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 SUN1O94901 812 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 TCF7P36402 384 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 FOXD4Q12950 439 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 PDIA5Q14554 519 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 DRAP1Q14919 205 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 MAPRE1Q15691 268 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 FBXO33Q7Z6M2 555 aa10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 ZNF564Q8TBZ8 553 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-211ENST00000621271 CFAP69A5D8W1 941 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 USP27XA6NNY8 438 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 KPNA6O60684 536 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 TRPA1O75762 1119 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 CDC27P30260 824 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GYS2P54840 703 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 CDH6P55285 790 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ART3Q13508 389 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 E2F4Q16254 413 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 TDRD10Q5VZ19 366 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ATG9AQ7Z3C6 839 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 SGMS1Q86VZ5 419 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 MXRA8Q9BRK3 442 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 NUP85Q9BW27 656 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ACTR5Q9H9F9 607 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 MST1RQ04912 1400 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 DLC1Q96QB1 1528 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PPFIA2O75334 1257 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 BACE1P56817 501 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PRKCQQ04759 706 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 POU5F1BQ06416 359 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GLE1Q53GS7 698 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ATG16L1Q676U5 607 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PID1Q7Z2X4 250 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 TMC7Q7Z402 723 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ANKRD7Q92527 254 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RMDN2Q96LZ7 410 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 TMEM39AQ9NV64 488 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 SENP1Q9P0U3 644 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GPR75-ASB3A0A0A6YYF3 556 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 KDM1AO60341 852 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 NPTXRO95502 500 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PNPLA4P41247 253 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RPS6P62753 249 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 CXCL9Q07325 125 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 NNTQ13423 1086 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ANO4Q32M45 955 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 DEFB128Q7Z7B8 93 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 MFN1Q8IWA4 741 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GUF1Q8N442 669 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GPRASP2Q96D09 838 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 AP1M1Q9BXS5 423 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PARVAQ9NVD7 372 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 SYNDIG1LA6NDD5 238 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 F5H423 210 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 HIST1H2AGP0C0S8 130 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RALBP11234 206 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 HIST1H2ADP20671 130 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 NMT1P30419 496 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PHEXP78562 749 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ROR1Q01973 937 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 C10orf120Q5SQS8 335 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 AP1ARQ63HQ0 302 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 ARHGAP18Q8N392 663 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 C18orf8Q96DM3 657 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 HIST1H2AHQ96KK5 128 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 PRMT6Q96LA8 375 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GBP5Q96PP8 586 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RIT2Q99578 217 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 HIST1H2AJQ99878 128 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 H2AFJQ9BTM1 129 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 RNF208Q9H0X6 261 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 STN1Q9H668 368 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 SAYSD1Q9NPB0 183 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms