RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ACO2Q99798 780 aaKnown RBP26.37■■□□□ 1.81
ATXN3-253ENST00000621269 CCDC94Q9BW85 323 aaPredicted RBP26.37■■□□□ 1.81
ATXN3-253ENST00000621269 WDR6Q9NNW5 1121 aaKnown RBP26.37■■□□□ 1.81
ATXN3-253ENST00000621269 GUCY2CP25092 1073 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 ZNF568Q3ZCX4 644 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 GLRA4Q5JXX5 417 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 LARP1BQ659C4 914 aaKnown RBP26.36■■□□□ 1.81
ATXN3-253ENST00000621269 ARL6IP4Q66PJ3 421 aaKnown RBP26.36■■□□□ 1.81
ATXN3-253ENST00000621269 PDXDC1Q6P996 788 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 LILRA6Q6PI73 481 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 TCHPQ9BT92 498 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 SMOC2Q9H3U7 446 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 TOPORSQ9NS56 1045 aaPredicted RBP26.36■■□□□ 1.81
ATXN3-253ENST00000621269 ZDHHC7Q9NXF8 308 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 ARHGAP28Q9P2N2 729 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 KCNG1Q9UIX4 513 aa26.36■■□□□ 1.81
ATXN3-253ENST00000621269 SFI1A8K8P3 1242 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 AVPR2P30518 371 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 GBP2P32456 591 aaPredicted RBP26.35■■□□□ 1.81
ATXN3-253ENST00000621269 GRM5P41594 1212 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PLXNA3P51805 1871 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 MAPK7Q13164 816 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PSMD5Q16401 504 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 HYIQ5T013 277 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PIK3R5Q8WYR1 880 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 UROC1Q96N76 676 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PNMA5Q96PV4 448 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PPP1R10Q96QC0 940 aaKnown RBP26.35■■□□□ 1.81
ATXN3-253ENST00000621269 PLIN2Q99541 437 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 TARS2Q9BW92 718 aaKnown RBP26.35■■□□□ 1.81
ATXN3-253ENST00000621269 CDT1Q9H211 546 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 CLUHO75153 1309 aa26.35■■□□□ 1.81
ATXN3-253ENST00000621269 SLC16A4O15374 487 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 PDGFBP01127 241 aaPredicted RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 PTPN5P54829 565 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 VCPP55072 806 aaKnown RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 OSTNP61366 133 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 RAD51AP2Q09MP3 1159 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 STRN3Q13033 797 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 DCLRE1AQ6PJP8 1040 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 ALYREFQ86V81 257 aaKnown RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 SYT2Q8N9I0 419 aaPredicted RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 PRSS33Q8NF86 280 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 LNX1Q8TBB1 728 aaPredicted RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 ZNF707Q96C28 371 aaPredicted RBP26.34■■□□□ 1.81
ATXN3-253ENST00000621269 TBC1D32Q96NH3 1257 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 PTPRHQ9HD43 1115 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 DENND4AQ7Z401 1863 aa26.34■■□□□ 1.81
ATXN3-253ENST00000621269 SMIM28A0A1B0GU29 152 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 B3GAT3O94766 335 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 CLCNKBP51801 687 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 SMTNP53814 917 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 TDGQ13569 410 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.33■■□□□ 1.81
ATXN3-253ENST00000621269 TAS1R3Q7RTX0 852 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 CLSTN3Q9BQT9 956 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 NTPCRQ9BSD7 190 aaKnown RBP26.33■■□□□ 1.81
ATXN3-253ENST00000621269 PRKD2Q9BZL6 878 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 KCNK12Q9HB15 430 aa26.33■■□□□ 1.81
ATXN3-253ENST00000621269 TMEM189-UBE2V1I3L0A0 370 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 ZMYND10O75800 440 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 PAPLNO95428 1278 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 PLA2G4BP0C869 781 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 MCF2P10911 925 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 PLS3P13797 630 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 MPZL3Q6UWV2 235 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 CEP120Q8N960 986 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 SPIRE2Q8WWL2 714 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 ACAP3Q96P50 834 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 SLC38A7Q9NVC3 462 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 KCND2Q9NZV8 630 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 IGSF9Q9P2J2 1179 aa26.32■■□□□ 1.8
ATXN3-253ENST00000621269 WDFY4Q6ZS81 3184 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 TRAPPC3O43617 180 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 UPP1Q16831 310 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 LIN9Q5TKA1 542 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 AK8Q96MA6 479 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 MFSD1Q9H3U5 465 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 FBXW11Q9UKB1 542 aa26.31■■□□□ 1.8
ATXN3-253ENST00000621269 N4BP1O75113 896 aaKnown RBP26.3■■□□□ 1.8
ATXN3-253ENST00000621269 HARSP12081 509 aaKnown RBP26.3■■□□□ 1.8
ATXN3-253ENST00000621269 FGFR3P22607 806 aa26.3■■□□□ 1.8
ATXN3-253ENST00000621269 SLC12A3P55017 1021 aa26.3■■□□□ 1.8
ATXN3-253ENST00000621269 ALKAL1Q6UXT8 129 aa26.3■■□□□ 1.8
ATXN3-253ENST00000621269 CALML4Q96GE6 196 aa26.3■■□□□ 1.8
ATXN3-253ENST00000621269 DDX27Q96GQ7 796 aaKnown RBP26.3■■□□□ 1.8
ATXN3-253ENST00000621269 GOLGA2P5Q9HBQ8 144 aa26.3■■□□□ 1.8
ATXN3-253ENST00000621269 C2orf16Q68DN1 1984 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 SLC26A4O43511 780 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 PROZP22891 400 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 UBA7P41226 1012 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 TMEM119Q4V9L6 283 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 XKR4Q5GH76 650 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 BRAPQ7Z569 592 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 TMEM161BQ8NDZ6 487 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.29■■□□□ 1.8
ATXN3-253ENST00000621269 EPS15L1Q9UBC2 864 aa26.29■■□□□ 1.8
ATXN3-253ENST00000621269 TOM1L1O75674 476 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 BMP15O95972 392 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 HNRNPA1P09651 372 aaKnown RBP eCLIP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms