RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 EXOC8Q8IYI6 725 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 CFAP36Q96G28 342 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 TSSK1BQ9BXA7 367 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 NEUROG2Q9H2A3 272 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 CCPG1Q9ULG6 757 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 TBC1D12O60347 775 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 SLC9A1P19634 815 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 PDE1BQ01064 536 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 PRPF18Q99633 342 aaKnown RBP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 SLCO1B3Q9NPD5 702 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 FRMPD2Q68DX3 1309 aaPredicted RBP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 RNF103-CHMP3A0A140T963 221 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 CDH16O75309 829 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ART3Q13508 389 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 SLC35G2Q8TBE7 412 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 PYDC1Q8WXC3 89 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 GCNAQ96QF7 691 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
SYNRG-229ENST00000621136 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 PIAS1O75925 651 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 CIITAP33076 1130 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 DAB2P98082 770 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 BAP1Q92560 729 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 COPEO14579 308 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 LPXNO60711 386 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 GFAPP14136 432 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 TUFMP49411 452 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 OASLQ15646 514 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 TSHZ1Q6ZSZ6 1077 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 INPP4AQ96PE3 977 aaPredicted RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 LRRC4CQ9HCJ2 640 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 KLHL11Q9NVR0 708 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 PACSIN3Q9UKS6 424 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 AP3B1O00203 1094 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 AGRPO00253 132 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 PDIA2Q13087 525 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 SLC12A6Q9UHW9 1150 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 PCDHA4Q9UN74 947 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 TJP1Q07157 1748 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 A6NJR5 290 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 DDAH1O94760 285 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 CHRNA3P32297 505 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 OCA2Q04671 838 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 DCTN2Q13561 401 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 ATG4AQ8WYN0 398 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 OSGEPQ9NPF4 335 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 DNAJC12Q9UKB3 198 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
SYNRG-229ENST00000621136 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
SYNRG-229ENST00000621136 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 KLRF2D3W0D1 207 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 DGKIO75912 1065 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 USP1O94782 785 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 USP11P51784 963 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 FOXD4Q12950 439 aaPredicted RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 IZUMO3Q5VZ72 239 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 MTHFD1LQ6UB35 978 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 TMC5Q6UXY8 1006 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 EME1Q96AY2 570 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 MTA3Q9BTC8 594 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 TRIM43BA6NCK2 446 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 UNC5CO95185 931 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 PATL1Q86TB9 770 aaKnown RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.29
SYNRG-229ENST00000621136 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
SYNRG-229ENST00000621136 TLR2O60603 784 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms