RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MTFR1Q15390 333 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 SYDE1Q6ZW31 735 aaPredicted RBP20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 ECHDC2Q86YB7 292 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 PWWP2AQ96N64 755 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 HERPUD2Q9BSE4 406 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 HSPBP1Q9NZL4 362 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 SLX4Q8IY92 1834 aa20.91■□□□□ 0.94
PDLIM3-212ENST00000620787 SKIV2L2P42285 1042 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 TRIP13Q15645 432 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ABCB5Q2M3G0 1257 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 B3GNT9Q6UX72 402 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 SEPT14Q6ZU15 432 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 PPM1KQ8N3J5 372 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 CNKSR1Q969H4 720 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ZC3H12CQ9C0D7 883 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 TMEM206Q9H813 350 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 PMM2O15305 246 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 NEBLO76041 1014 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ARP10275 920 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 CYP11B1P15538 503 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 JAG1P78504 1218 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 CCDC15Q0P6D6 951 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ACVR2BQ13705 512 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 TNIP1Q15025 636 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 MAEAQ7L5Y9 396 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 DHX37Q8IY37 1157 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 XXYLT1Q8NBI6 393 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 SEMA4DQ92854 862 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ZDHHC15Q96MV8 337 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 ZNF577Q9BSK1 485 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 PLVAPQ9BX97 442 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 WDR11Q9BZH6 1224 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 KLHL14Q9P2G3 628 aa20.9■□□□□ 0.94
PDLIM3-212ENST00000620787 SORBS3O60504 671 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 TAC1P20366 129 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 FOXN2P32314 431 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 CDR2Q01850 454 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 CAV1Q03135 178 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 CEP55Q53EZ4 464 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 PADI6Q6TGC4 694 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 ARHGEF18Q6ZSZ5 1173 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 ACCSQ96QU6 501 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 DCLK3Q9C098 648 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 TBK1Q9UHD2 729 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 NAALADL1Q9UQQ1 740 aa20.89■□□□□ 0.94
PDLIM3-212ENST00000620787 TMEM63BQ5T3F8 832 aa20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 SRRM1Q8IYB3 904 aaKnown RBP20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 TRAIPQ9BWF2 469 aa20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 TRIM7Q9C029 511 aa20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 EURLQ9NYK6 297 aa20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 ANAPC5Q9UJX4 755 aa20.89■□□□□ 0.93
PDLIM3-212ENST00000620787 HGSO14964 777 aaPredicted RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 UNC5CO95185 931 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ADRB2P07550 413 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ATF2P15336 505 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 MAN1A1P33908 653 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 MFAP3P55082 362 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 STRN3Q13033 797 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ALCAMQ13740 583 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 PAXIP1Q6ZW49 1069 aaPredicted RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 DDX1Q92499 740 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 MOV10L1Q9BXT6 1211 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 KCNQ5Q9NR82 932 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 NKIRAS1Q9NYS0 192 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 MAPK13O15264 365 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 CDH16O75309 829 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 SKAP2O75563 359 aaPredicted RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 WFS1O76024 890 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 MAPTP10636 758 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 CCNG1P51959 295 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ATP11AP98196 1134 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ACAD10Q6JQN1 1059 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 KIAA0825Q8IV33 1275 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 GRK7Q8WTQ7 553 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 UTP4Q969X6 686 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 GRAMD1AQ96CP6 724 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 TEKT3Q9BXF9 490 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 LARSQ9P2J5 1176 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 R3HDM2Q9Y2K5 976 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 NEU2Q9Y3R4 380 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 ACTL7BQ9Y614 415 aa20.88■□□□□ 0.93
PDLIM3-212ENST00000620787 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 GRIN3BO60391 1043 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 GAS8O95995 478 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 ATP2A2P16615 1042 aaKnown RBP20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 ADCY1Q08828 1119 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 IDI2Q9BXS1 227 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 KLRG2A4D1S0 409 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 POLR2MP0CAP2 368 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 ADCY8P40145 1251 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 PPP1R21Q6ZMI0 780 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 HELQQ8TDG4 1101 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 MAIP1Q8WWC4 291 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 ANAPC7Q9UJX3 599 aa20.87■□□□□ 0.93
PDLIM3-212ENST00000620787 VIL1P09327 827 aaKnown RBP20.86■□□□□ 0.93
PDLIM3-212ENST00000620787 POTEJP0CG39 1038 aa20.86■□□□□ 0.93
PDLIM3-212ENST00000620787 MAPK4P31152 587 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms