RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 MAPK6Q16659 721 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 USP49Q70CQ1 688 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 SNX29Q8TEQ0 813 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 CCDC34Q96HJ3 373 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 IFT74Q96LB3 600 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 KIFC3Q9BVG8 833 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 SNTG2Q9NY99 539 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
CD40-207ENST00000620709 TTLL13PA6NNM8 815 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 N4BP3O15049 544 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 INPPL1O15357 1258 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 ADH1AP07327 375 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 FXR2P51116 673 aaKnown RBP eCLIP17.67■□□□□ 0.42
CD40-207ENST00000620709 DSC1Q08554 894 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
CD40-207ENST00000620709 CDCA2Q69YH5 1023 aaPredicted RBP17.67■□□□□ 0.42
CD40-207ENST00000620709 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 KRBA2Q6ZNG9 492 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 ELOA2Q8IYF1 753 aaPredicted RBP17.67■□□□□ 0.42
CD40-207ENST00000620709 FUCA2Q9BTY2 467 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 FZD8Q9H461 694 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 PDZD7Q9H5P4 517 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 LIMD1Q9UGP4 676 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 USP25Q9UHP3 1055 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
CD40-207ENST00000620709 TEX28O15482 410 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 LILRB3O75022 631 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 TADA2AO75478 443 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 ASGR2P07307 311 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 SPATA31D3P0C874 917 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 NAMPTP43490 491 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 GRIK3Q13003 919 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 PPP2R5AQ15172 486 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 ZRSR1Q15695 479 aaKnown RBP17.67■□□□□ 0.42
CD40-207ENST00000620709 SPATA31D4Q6ZUB0 917 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 PALB2Q86YC2 1186 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 PDILTQ8N807 584 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 HASPINQ8TF76 798 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 MAN1C1Q9NR34 630 aa17.67■□□□□ 0.42
CD40-207ENST00000620709 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 GLUD1P00367 558 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 FAM187BQ17R55 369 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 FUT10Q6P4F1 479 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 SASS6Q6UVJ0 657 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 BMP8AQ7Z5Y6 402 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 GPR149Q86SP6 731 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 GSTCDQ8NEC7 633 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
CD40-207ENST00000620709 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 GDAQ9Y2T3 454 aa17.66■□□□□ 0.42
CD40-207ENST00000620709 MYO10Q9HD67 2058 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 PP2D1A8MPX8 630 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 ACTN4O43707 911 aaKnown RBP17.65■□□□□ 0.42
CD40-207ENST00000620709 MUTP22033 750 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 UBA7P41226 1012 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 MRE11P49959 708 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 TYRO3Q06418 890 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 MTMR3Q13615 1198 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 KIAA0319Q5VV43 1072 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 KRT79Q5XKE5 535 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 ELMSAN1Q6PJG2 1045 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 CCDC149Q6ZUS6 474 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 CEP57L1Q8IYX8 460 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 FBXL6Q8N531 539 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 IGSF22Q8N9C0 903 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 IQUBQ8NA54 791 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 DHX58Q96C10 678 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 ACSF2Q96CM8 615 aaPredicted RBP17.65■□□□□ 0.42
CD40-207ENST00000620709 PAAF1Q9BRP4 392 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 SMOC2Q9H3U7 446 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 GRPEL1Q9HAV7 217 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 SERTAD1Q9UHV2 236 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 ADAM28Q9UKQ2 775 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 SORCS3Q9UPU3 1222 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 PLXNA3P51805 1871 aa17.65■□□□□ 0.42
CD40-207ENST00000620709 A0A087X0B3 334 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 CCDC195A0A1B0GUA6 201 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 E9PMD0 336 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 ACKR2O00590 384 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 RECQL4O94761 1208 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 EDN1P05305 212 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 RPL17P18621 184 aaKnown RBP17.64■□□□□ 0.41
CD40-207ENST00000620709 CDC25AP30304 524 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 DSG1Q02413 1049 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 PDIA5Q14554 519 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 HSP90AA2PQ14568 343 aaPredicted RBP17.64■□□□□ 0.41
CD40-207ENST00000620709 IER5LQ5T953 404 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 EEF1DP3Q658K8 133 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 ALYREFQ86V81 257 aaKnown RBP17.64■□□□□ 0.41
CD40-207ENST00000620709 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 ASIC4Q96FT7 647 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms