RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PPP1R9AQ9ULJ8 1098 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SNRNP48Q6IEG0 339 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 TRMT10CQ7L0Y3 403 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CRLF3Q8IUI8 442 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 RTKN2Q8IZC4 609 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ATL2Q8NHH9 583 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 KLC2Q9H0B6 622 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 POLIQ9UNA4 740 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 MYO3BQ8WXR4 1341 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SPECC1L-ADORA2AF8WAN1 911 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CIITAP33076 1130 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ZNF667Q5HYK9 610 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CYFIP1Q7L576 1253 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CRAMP1Q96RY5 1269 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SH2D3AQ9BRG2 576 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 MMTAG2Q9BU76 263 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ASNSD1Q9NWL6 643 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 FAM107AO95990 144 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 BMP6P22004 513 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 P3H1Q32P28 736 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 MEI1Q5TIA1 1274 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ERP44Q9BS26 406 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 TRAIPQ9BWF2 469 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 THAP2Q9H0W7 228 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 IL17RBQ9NRM6 502 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 UVRAGQ9P2Y5 699 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CHORDC1Q9UHD1 332 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 STRIP2Q9ULQ0 834 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CNTNAP4Q9C0A0 1308 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 GPC4O75487 556 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 HAUS5O94927 633 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 YWHAHQ04917 246 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 STAT4Q14765 748 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 TRIM72Q6ZMU5 477 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 VGLL2Q8N8G2 317 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 MDM1Q8TC05 714 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 RBAKQ9NYW8 714 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 KCND2Q9NZV8 630 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 MOSPD1Q9UJG1 213 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 PRR12Q9ULL5 1215 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CASZ1Q86V15 1759 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 TNS2Q63HR2 1409 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 PHEXP78562 749 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 NSUN2Q08J23 767 aaKnown RBP eCLIP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ARL13BQ3SXY8 428 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 URGCPQ8TCY9 931 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 RNF146Q9NTX7 359 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 PPARGC1AQ9UBK2 798 aaKnown RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 PCSK1NQ9UHG2 260 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ARL2BPQ9Y2Y0 163 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 RSPH10B2B2RC85 870 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 KRT37O76014 449 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 RSPH10BP0C881 870 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ITIH2P19823 946 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 STXBP2Q15833 593 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CNPY4Q8N129 248 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 EXT2Q93063 718 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 GRAMD1AQ96CP6 724 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CYTH2Q99418 400 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 SLC40A1Q9NP59 571 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 MST1RQ04912 1400 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 KPNA2P52292 529 aaKnown RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 SNRNP35Q16560 246 aaKnown RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CENPPQ6IPU0 288 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 C2orf69Q8N8R5 385 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 DUSP9Q99956 384 aaKnown RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 POLR3CQ9BUI4 534 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 AGO2Q9UKV8 859 aaKnown RBP8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ITM2BQ9Y287 266 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 ALG6Q9Y672 507 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 JCADQ9P266 1359 aa8.84□□□□□ -0.99
ALMS1-208ENST00000620466 F8W8V4 182 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 M0QYV0 167 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 MSH4O15457 936 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 HNRNPH1P31943 449 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 RNF219Q5W0B1 726 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 AP1ARQ63HQ0 302 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FRA10AC1Q70Z53 315 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 RTFDC1Q9BY42 306 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 EPS15L1Q9UBC2 864 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 NAGPAQ9UK23 515 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 ROR1Q01973 937 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 C1orf228Q6PIY5 440 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 HHIPL2Q6UWX4 724 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FAM118BQ9BPY3 351 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 TIPINQ9BVW5 301 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 TRABDQ9H4I3 376 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 HERC5Q9UII4 1024 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms