RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ANP32BQ92688 251 aaKnown RBP8.72□□□□□ -1.01
CPNE3-209ENST00000620393 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 ACAP3Q96P50 834 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 EIF2AQ9BY44 585 aaKnown RBP8.72□□□□□ -1.01
CPNE3-209ENST00000620393 TMX1Q9H3N1 280 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 NDST4Q9H3R1 872 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 RPF1Q9H9Y2 349 aaKnown RBP8.72□□□□□ -1.01
CPNE3-209ENST00000620393 PMM2O15305 246 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 STX10O60499 249 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 TIMP1P01033 207 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CXCL10P02778 98 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 GTF2H1P32780 548 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CYP2C18P33260 490 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CCL23P55773 120 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 OSTNP61366 133 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 DLG4P78352 724 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 UBXN1Q04323 297 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 ENOX2Q16206 610 aaKnown RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 SLC10A6Q3KNW5 377 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 FKBP15Q5T1M5 1219 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 COL13A1Q5TAT6 717 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 TCERG1LQ5VWI1 586 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 MRPL10Q7Z7H8 261 aaKnown RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 RTN4RL1Q86UN2 441 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 BRSK2Q8IWQ3 736 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CD302Q8IX05 232 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM192Q8IY95 271 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CEP120Q8N960 986 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 DBF4BQ8NFT6 615 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 SEPT8Q92599 483 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CCDC127Q96BQ5 260 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 POP1Q99575 1024 aaKnown RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 ADAM2Q99965 735 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 CCDC94Q9BW85 323 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 FTHL17Q9BXU8 183 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 PPP1R12CQ9BZL4 782 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 PLEKHA5Q9HAU0 1116 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 RGS18Q9NS28 235 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 INTS13Q9NVM9 706 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 SNTG2Q9NY99 539 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-209ENST00000620393 PCDHB2Q9Y5E7 798 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 UMODL1Q5DID0 1318 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 KAT6AQ92794 2004 aa8.71□□□□□ -1.02
CPNE3-209ENST00000620393 ARID2Q68CP9 1835 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 KIAA0100Q14667 2235 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 EVPLQ92817 2033 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 A0A0U1RQF3 1178 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 A0A1W2PQC6 194 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TTC26A0AVF1 554 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM43BA6NCK2 446 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 LRRIQ3A6PVS8 624 aaPredicted RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 LACTBL1A8MY62 500 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 PES1O00541 588 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ENPP3O14638 875 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 P4HA2O15460 535 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 MGEA5O60502 916 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 IL18RAPO95256 599 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 C4BPAP04003 597 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM49P0CI25 452 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM49CP0CI26 452 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 DLATP10515 647 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 SKIP12755 728 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 RFC2P35250 354 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 PBX1P40424 430 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 AP3M2P53677 418 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 WNT7BP56706 349 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 PPP3CAQ08209 521 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 DSG2Q14126 1118 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 XKR4Q5GH76 650 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 DCAF17Q5H9S7 520 aaPredicted RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ALKAL1Q6UXT8 129 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 HACE1Q8IYU2 909 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 APBB2Q92870 758 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM43Q96BQ3 446 aaPredicted RBP8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ABHD8Q96I13 439 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 SCLYQ96I15 445 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ERGIC2Q96RQ1 377 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 TSPAN18Q96SJ8 248 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 WNT8AQ9H1J5 351 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 ASB7Q9H672 318 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 HES2Q9Y543 173 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 IPPQ9Y573 584 aa8.7□□□□□ -1.02
CPNE3-209ENST00000620393 GTPBP10A4D1E9 387 aaKnown RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 C9IYK1 514 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 RBAK-RBAKDNI3L0D1 243 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms