RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
LINC00221-202ENST00000619530 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
LINC00221-202ENST00000619530 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
LINC00221-202ENST00000619530 LILRB3O75022 631 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00221-202ENST00000619530 YARSP54577 528 aaKnown RBP17.17■□□□□ 0.34
LINC00221-202ENST00000619530 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 FUT10Q6P4F1 479 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 CEP120Q8N960 986 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 TMEM161BQ8NDZ6 487 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 GPT2Q8TD30 523 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 REEP2Q9BRK0 252 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 ADAM7Q9H2U9 754 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 PTPRHQ9HD43 1115 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
LINC00221-202ENST00000619530 TRIP11Q15643 1979 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 FAM13AO94988 1023 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 MAPTP10636 758 aaKnown RBP17.16■□□□□ 0.34
LINC00221-202ENST00000619530 ALADP13716 330 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 CLCN4P51793 760 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 RIN2Q8WYP3 895 aaPredicted RBP17.16■□□□□ 0.34
LINC00221-202ENST00000619530 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 FBXL18Q96ME1 805 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 ZSCAN16Q9H4T2 348 aaPredicted RBP17.16■□□□□ 0.34
LINC00221-202ENST00000619530 DZANK1Q9NVP4 752 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
LINC00221-202ENST00000619530 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 MUTYHQ9UIF7 546 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
LINC00221-202ENST00000619530 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
LINC00221-202ENST00000619530 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 TEX28O15482 410 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 EFEMP2O95967 443 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 F13A1P00488 732 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 MCF2P10911 925 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 GRM5P41594 1212 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 DSG1Q02413 1049 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 ITIH3Q06033 890 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 ZSCAN23Q3MJ62 389 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 SEZ6Q53EL9 994 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 MPZL3Q6UWV2 235 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 TMC5Q6UXY8 1006 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 BICD1Q96G01 975 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
LINC00221-202ENST00000619530 TFIP11Q9UBB9 837 aaKnown RBP17.15■□□□□ 0.34
LINC00221-202ENST00000619530 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 LOC730098B7Z3J9 87 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 DCXO43602 365 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 KIF4AO95239 1232 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 NAB2Q15742 525 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 RRAGBQ5VZM2 374 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 RNF168Q8IYW5 571 aaPredicted RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 FEZF2Q8TBJ5 459 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 LARP4BQ92615 738 aaKnown RBP17.14■□□□□ 0.33
LINC00221-202ENST00000619530 LRFN3Q9BTN0 628 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
LINC00221-202ENST00000619530 TBCAO75347 108 aaKnown RBP17.13■□□□□ 0.33
LINC00221-202ENST00000619530 ADH1AP07327 375 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 COL9A1P20849 921 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
LINC00221-202ENST00000619530 TXLNAP40222 546 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 STK38Q15208 465 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
LINC00221-202ENST00000619530 RIPOR3Q96MK2 946 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 POMKQ9H5K3 350 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 GOLGA2P5Q9HBQ8 144 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 TOPORSQ9NS56 1045 aaPredicted RBP17.13■□□□□ 0.33
LINC00221-202ENST00000619530 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
LINC00221-202ENST00000619530 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC00221-202ENST00000619530 H0YCG3 227 aa17.12■□□□□ 0.33
LINC00221-202ENST00000619530 K7ENM7 598 aa17.12■□□□□ 0.33
LINC00221-202ENST00000619530 ABLIM1O14639 778 aa17.12■□□□□ 0.33
LINC00221-202ENST00000619530 CLDN3O15551 220 aa17.12■□□□□ 0.33
LINC00221-202ENST00000619530 TOM1L1O75674 476 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms