RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SCAF8Q9UPN6 1271 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 FDX1P10109 184 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ABCE1P61221 599 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SGSM1Q2NKQ1 1148 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PREPLQ4J6C6 727 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 C4orf22Q6V702 233 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ANKS1AQ92625 1134 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RNF103-CHMP3A0A140T963 221 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PYGBP11216 843 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 STMN1P16949 149 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CA4P22748 312 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ARL4AP40617 200 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CACNB3P54284 484 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 GPSM2P81274 684 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RARS2Q5T160 578 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SWSAP1Q6NVH7 229 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ZC3H18Q86VM9 953 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CREG2Q8IUH2 290 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TMCO5AQ8N6Q1 288 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PPM1NQ8N819 430 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DNAAF3Q8N9W5 541 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 FAM149B1Q96BN6 582 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 C2orf40Q9H1Z8 148 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NOD2Q9HC29 1040 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DCTN4Q9UJW0 460 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KIF21AQ7Z4S6 1674 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 USP17L10C9JJH3 530 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PPEF1O14829 653 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 LPXNO60711 386 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NTRK3Q16288 839 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DNAL1Q4LDG9 190 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ZBTB41Q5SVQ8 909 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KBTBD4Q9NVX7 518 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NXF1Q9UBU9 619 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 USP31Q70CQ4 1352 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PALLDQ8WX93 1383 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RNF225M0QZC1 329 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 COMTP21964 271 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RBP5P82980 135 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 SBK1Q52WX2 424 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NUGGCQ68CJ6 796 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 GRAMD4Q6IC98 578 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 LRRC8BQ6P9F7 803 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RBM46Q8TBY0 533 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SLC9A2Q9UBY0 812 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CDY2AQ9Y6F7 541 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CDY1Q9Y6F8 540 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RBM47A0AV96 593 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 TRIM49BA6NDI0 452 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 STK25O00506 426 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CLDN3O15551 220 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PDHA1P08559 390 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NQO1P15559 274 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 MAGEA4P43358 317 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ZNF200P98182 395 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CDC16Q13042 620 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 STX3Q13277 289 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 SLC29A2Q14542 456 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TBCCQ15814 346 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ZNF699Q32M78 642 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RNF169Q8NCN4 708 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PIGOQ8TEQ8 1089 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 AENQ8WTP8 325 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 UBN1Q9NPG3 1134 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TRAPPC3O43617 180 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ACADSP16219 412 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PPARGP37231 505 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 DYNLT1P63172 113 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CCNA1P78396 465 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 AMPD2Q01433 879 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZBTB33Q86T24 672 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PATL1Q86TB9 770 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 ATP8B3O60423 1300 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PNPLA7Q6ZV29 1317 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RFX7Q2KHR2 1363 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 NUMA1Q14980 2115 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CFAP69A5D8W1 941 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 HNRNPDLO14979 420 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 FSBPO95073 299 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 GCLMP48507 274 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RWDD4Q6NW29 188 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 TAB3Q8N5C8 712 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 KRT35Q92764 455 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 DCPSQ96C86 337 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 ANO3Q9BYT9 981 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CHN1P15882 459 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 INPP1P49441 399 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 FXR2P51116 673 aaKnown RBP eCLIP3.22□□□□□ -1.89
LPP-221ENST00000618621 NOP14P78316 857 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 ROR1Q01973 937 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CACNB1Q02641 598 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 SLC27A3Q5K4L6 730 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CENPPQ6IPU0 288 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TRIM67Q6ZTA4 783 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 C11orf96Q7Z7L8 435 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ATP11CQ8NB49 1132 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms