RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
SHANK2-221ENST00000618363 PTGESO14684 152 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 TEX28O15482 410 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 CLDN3O15551 220 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 STX6O43752 255 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 LILRB3O75022 631 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 TOM1L1O75674 476 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 B3GAT3O94766 335 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 PLCG1P19174 1290 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 GLRA4Q5JXX5 417 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 FAM171A1Q5VUB5 890 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 KIAA0319Q5VV43 1072 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 DCLRE1AQ6PJP8 1040 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 ZPBP2Q6X784 338 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 HASPINQ8TF76 798 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 LARP4BQ92615 738 aaKnown RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 RAD54LQ92698 747 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 ACSF2Q96CM8 615 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
SHANK2-221ENST00000618363 TTPALQ9BTX7 342 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 GPR62Q9BZJ7 368 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 CCSER1Q9C0I3 900 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 CDT1Q9H211 546 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 PIDD1Q9HB75 910 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 MAN1C1Q9NR34 630 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 CHST7Q9NS84 486 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 FNIP2Q9P278 1114 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 MYH11P35749 1972 aa12.81□□□□□ -0.36
SHANK2-221ENST00000618363 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 K7ENM7 598 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 EDN1P05305 212 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 DDIT3P35638 169 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 LIG4P49917 911 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 RESTQ13127 1097 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 MCM6Q14566 821 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 KYAT1Q16773 422 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 CCDC149Q6ZUS6 474 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 TDRD5Q8NAT2 981 aaKnown RBP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 TMEM161BQ8NDZ6 487 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 HDAC7Q8WUI4 952 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 REEP2Q9BRK0 252 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 POMKQ9H5K3 350 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
SHANK2-221ENST00000618363 SRPRBQ9Y5M8 271 aaKnown RBP12.8□□□□□ -0.36
SHANK2-221ENST00000618363 SMIM28A0A1B0GU29 152 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 F8W810 466 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 HNRNPDLO14979 420 aaKnown RBP12.79□□□□□ -0.36
SHANK2-221ENST00000618363 TRAK2O60296 914 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 KIF4AO95239 1232 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 C1RP00736 705 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 GRIN1Q05586 938 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 STK38Q15208 465 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 PSMD5Q16401 504 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 ARSHQ5FYA8 562 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 SPECC1Q5M775 1068 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-221ENST00000618363 C15orf39Q6ZRI6 1047 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 SV2BQ7L1I2 683 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 OTOP3Q7RTS5 596 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 GPR149Q86SP6 731 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 STAMQ92783 540 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 EDAQ92838 391 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 SNX21Q969T3 373 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 MFSD14AQ96MC6 490 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 PAAF1Q9BRP4 392 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 CACNG4Q9UBN1 327 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-221ENST00000618363 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
SHANK2-221ENST00000618363 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
SHANK2-221ENST00000618363 BRD1O95696 1058 aa12.78□□□□□ -0.36
SHANK2-221ENST00000618363 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
SHANK2-221ENST00000618363 MYBP10242 640 aa12.78□□□□□ -0.36
SHANK2-221ENST00000618363 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
SHANK2-221ENST00000618363 CLCNKBP51801 687 aa12.78□□□□□ -0.36
SHANK2-221ENST00000618363 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms