RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 KIAA1755Q5JYT7 1200 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 TDRD10Q5VZ19 366 aaKnown RBP5.5□□□□□ -1.53
CUL3-216ENST00000617432 OTUD7BQ6GQQ9 843 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 METTL16Q86W50 562 aaKnown RBP5.5□□□□□ -1.53
CUL3-216ENST00000617432 KLHL36Q8N4N3 616 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 CRACR2BQ8N4Y2 399 aaPredicted RBP5.5□□□□□ -1.53
CUL3-216ENST00000617432 ANKRD13CQ8N6S4 541 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.5□□□□□ -1.53
CUL3-216ENST00000617432 TXNRD2Q9NNW7 524 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 GULP1Q9UBP9 304 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 AGTPBP1Q9UPW5 1226 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 SALL3Q9BXA9 1300 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 MGAMO43451 1857 aa5.5□□□□□ -1.53
CUL3-216ENST00000617432 PLXNB2O15031 1838 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 A0A1W2PRG0 241 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 CXCL11O14625 94 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 IGHDP01880 384 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 NTRK1P04629 796 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 AKR1B1P15121 316 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 EN2P19622 333 aaPredicted RBP5.49□□□□□ -1.53
CUL3-216ENST00000617432 PSMC4P43686 418 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 PMS1P54277 932 aaKnown RBP5.49□□□□□ -1.53
CUL3-216ENST00000617432 GABPAQ06546 454 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 ADAM9Q13443 819 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 SEPT2Q15019 361 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 TATDN1Q6P1N9 297 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 CCDC129Q6ZRS4 1044 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 HS2ST1Q7LGA3 356 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 OSBP2Q969R2 916 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 PARK7Q99497 189 aaKnown RBP5.49□□□□□ -1.53
CUL3-216ENST00000617432 ECHDC1Q9NTX5 307 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
CUL3-216ENST00000617432 HERC5Q9UII4 1024 aaKnown RBP5.49□□□□□ -1.53
CUL3-216ENST00000617432 FOXP2O15409 715 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CNMDO75829 334 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 TP53P04637 393 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 HLA-DOAP06340 250 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 TTF1Q15361 905 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 PKN2Q16513 984 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 USP39Q53GS9 565 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 ARMC5Q96C12 935 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 ZNF333Q96JL9 665 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 ADOQ96SZ5 270 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 P2RX7Q99572 595 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 AP5M1Q9H0R1 490 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 DHX36Q9H2U1 1008 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 ZCCHC17Q9NP64 241 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 FAM86C1Q9NVL1 165 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 SERPINB13Q9UIV8 391 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 SLC4A4Q9Y6R1 1079 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 MYPNQ86TC9 1320 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 RBBP6Q7Z6E9 1792 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 GSG1L2A8MUP6 293 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 MPHOSPH10O00566 681 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 GPAA1O43292 621 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CYP7B1O75881 506 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CD247P20963 164 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 BACE1P56817 501 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 ABCB5Q2M3G0 1257 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CERKLQ49MI3 558 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 ANKRD45Q5TZF3 282 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CTR9Q6PD62 1173 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 FASTKD5Q7L8L6 764 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 RASGRP2Q7LDG7 609 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 SKAP1Q86WV1 359 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 FOXP4Q8IVH2 680 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 SLITRK4Q8IW52 837 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 KBTBD3Q8NAB2 608 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 SMCR8Q8TEV9 937 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 NEU4Q8WWR8 484 aaPredicted RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 CHMP4CQ96CF2 233 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 PAGR1Q9BTK6 254 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 CRNKL1Q9BZJ0 848 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 PORCNQ9H237 461 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 NOL6Q9H6R4 1146 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 SEC61A2Q9H9S3 476 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 INCENPQ9NQS7 918 aa5.48□□□□□ -1.53
CUL3-216ENST00000617432 DIS3Q9Y2L1 958 aaKnown RBP5.48□□□□□ -1.53
CUL3-216ENST00000617432 GREB1LQ9C091 1923 aaPredicted RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 A0A0G2JMZ2 1700 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 TNPO2O14787 897 aaKnown RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 RNF113AO15541 343 aaKnown RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 PRDM1O75626 825 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 ASNSP08243 561 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 VCAM1P19320 739 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 MX1P20591 662 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 FLT3LGP49771 235 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 UBE3CQ15386 1083 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 AXDND1Q5T1B0 1012 aaPredicted RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 C12orf60Q5U649 245 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 VPS53Q5VIR6 699 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 APPBP2Q92624 585 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 EDAQ92838 391 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 FEZ1Q99689 392 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms