RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 IRF1P10914 325 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PDXDC1Q6P996 788 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 XPNPEP3Q9NQH7 507 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PFDN6O15212 129 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 APOEP02649 317 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 RAG1P15918 1043 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 TFDP2Q14188 446 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 NAA30Q147X3 362 aaPredicted RBP10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 SLMAPQ14BN4 828 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 IQCB1Q15051 598 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 TLK2Q86UE8 772 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 PPM1EQ8WY54 764 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 RABGGTAQ92696 567 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 AGAP3Q96P47 875 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 AGPAT1Q99943 283 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 POLR3CQ9BUI4 534 aaPredicted RBP10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 TRIM10Q9UDY6 481 aa10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 IPO11Q9UI26 975 aaKnown RBP10.77□□□□□ -0.68
SMARCA1-205ENST00000617310 MAP3K6O95382 1288 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 ALDH7A1P49419 539 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 GNGT1P63211 74 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 AFAP1L2Q8N4X5 818 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 BBOF1Q8ND07 529 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 SH3TC2Q8TF17 1288 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 MAP3K20Q9NYL2 800 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 CAPN15O75808 1086 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 TJP3O95049 919 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 AP1B1Q10567 949 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 SGSM1Q2NKQ1 1148 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 DCAF4L1Q3SXM0 396 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 EFHC2Q5JST6 749 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 ARRDC4Q8NCT1 418 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 PYROXD1Q8WU10 500 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 PBKQ96KB5 322 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 FMO2Q99518 471 aa10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 SARS2Q9NP81 518 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-205ENST00000617310 EML1O00423 815 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 POMCP01189 267 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ACO1P21399 889 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ALDH5A1P51649 535 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 GALCP54803 685 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ST3GAL1Q11201 340 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CROCCP2Q86T23 111 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CDC26Q8NHZ8 85 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 MCUR1Q96AQ8 359 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 NCAPGQ9BPX3 1015 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 FSD1LQ9BXM9 530 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ABHD16BQ9H3Z7 469 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 RIC1Q4ADV7 1423 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 EXOC1LA0A1B0GW35 172 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CASTOR2A6NHX0 329 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 GBP1P32455 592 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 GTF2H1P32780 548 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 MSH2P43246 934 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 TPD52P55327 224 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 USP33Q8TEY7 942 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 AGO4Q9HCK5 861 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 NAGPAQ9UK23 515 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ANGPTL3Q9Y5C1 460 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 RP1L1Q8IWN7 2480 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 AKAP5P24588 427 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 CDK17Q00537 523 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 SMTNL2Q2TAL5 461 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 SPOPLQ6IQ16 392 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 C10orf67Q8IYJ2 551 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 ACSF2Q96CM8 615 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 NT5C1AQ9BXI3 368 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 SAYSD1Q9NPB0 183 aa10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-205ENST00000617310 DFFAO00273 331 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 OGTO15294 1046 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 EDRF1Q3B7T1 1238 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 DCAF6Q58WW2 860 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 FKBP1CQ5VVH2 108 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PCNX4Q63HM2 1172 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 DNAAF5Q86Y56 855 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 MIB1Q86YT6 1006 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 ENGASEQ8NFI3 743 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 OR6P1Q8NGX9 317 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 RBM41Q96IZ5 413 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 MCEEQ96PE7 176 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CAMKK2Q96RR4 588 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 YME1L1Q96TA2 773 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 FAM114A2Q9NRY5 505 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PCDHB7Q9Y5E2 793 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 RNF40O75150 1001 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CLTAP09496 248 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms