RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 MGEA5O60502 916 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 NBNO60934 754 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
CBWD1-225ENST00000616944 IL18RAPO95256 599 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 GYPCP04921 128 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
CBWD1-225ENST00000616944 GCLMP48507 274 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 MXI1P50539 228 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 TWF2Q6IBS0 349 aaKnown RBP16.45■□□□□ 0.22
CBWD1-225ENST00000616944 WDR49Q8IV35 697 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 RPF1Q9H9Y2 349 aaKnown RBP16.45■□□□□ 0.22
CBWD1-225ENST00000616944 TMEM8AQ9HCN3 771 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 ATP11BQ9Y2G3 1177 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 COQ4Q9Y3A0 265 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 HES2Q9Y543 173 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 IPPQ9Y573 584 aa16.45■□□□□ 0.22
CBWD1-225ENST00000616944 STX10O60499 249 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 MYL7Q01449 175 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 SURF1Q15526 300 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 EXOC3L4Q17RC7 722 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 EPC2Q52LR7 807 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 FIGNQ5HY92 759 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 SV2AQ7L0J3 742 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 EFCAB13Q8IY85 973 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 LMO3Q8TAP4 145 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 ACAP3Q96P50 834 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 CRACR2AQ9BSW2 395 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 CCDC94Q9BW85 323 aaPredicted RBP16.44■□□□□ 0.22
CBWD1-225ENST00000616944 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
CBWD1-225ENST00000616944 TRIM6Q9C030 488 aaPredicted RBP16.44■□□□□ 0.22
CBWD1-225ENST00000616944 ASB7Q9H672 318 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 FAM105AQ9NUU6 356 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 SNTG2Q9NY99 539 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 TTC3P53804 2025 aa16.44■□□□□ 0.22
CBWD1-225ENST00000616944 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
CBWD1-225ENST00000616944 CLTBP09497 229 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 PON1P27169 355 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 ZACNQ401N2 412 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
CBWD1-225ENST00000616944 KRT39Q6A163 491 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 ALKAL1Q6UXT8 129 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 SNX27Q96L92 541 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 MMRN2Q9H8L6 949 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 PCDHB2Q9Y5E7 798 aa16.43■□□□□ 0.22
CBWD1-225ENST00000616944 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 EPHB6O15197 1021 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 ZNF623O75123 536 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 RECQL4O94761 1208 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 NOL4O94818 638 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 ZSCAN20P17040 1043 aaPredicted RBP16.42■□□□□ 0.22
CBWD1-225ENST00000616944 TNNI1P19237 187 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 SLC9A1P19634 815 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
CBWD1-225ENST00000616944 TRIM65Q6PJ69 517 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 LINC01599Q8WXQ3 324 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 SIX2Q9NPC8 291 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
CBWD1-225ENST00000616944 SCN1AP35498 2009 aa16.42■□□□□ 0.22
CBWD1-225ENST00000616944 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CXCL10P02778 98 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 NFICP08651 508 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 AP3M2P53677 418 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 APBA1Q02410 837 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 TRIM14Q14142 442 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 FAM43BQ6ZT52 329 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 MRPL10Q7Z7H8 261 aaKnown RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CD302Q8IX05 232 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 ADAM2Q99965 735 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 GANQ9H2C0 597 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 C2CD2Q9Y426 696 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 A0A0U1RQF3 1178 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 LRRN2O75325 713 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CAPN15O75808 1086 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 VNN1O95497 513 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CYP2C18P33260 490 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 RAB27AP51159 221 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 JADE1Q6IE81 842 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 RTN4RL1Q86UN2 441 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-225ENST00000616944 NT5DC4Q86YG4 428 aa16.41■□□□□ 0.22
CBWD1-225ENST00000616944 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms