RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 SGSM1Q2NKQ1 1148 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 DCAF4L1Q3SXM0 396 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 THEMIS2Q5TEJ8 643 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 TTC30BQ8N4P2 665 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 RAET1EQ8TD07 263 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 SH3KBP1Q96B97 665 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 TRPV6Q9H1D0 765 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 SPATS2LQ9NUQ6 558 aaKnown RBP18.71■□□□□ 0.59
ATXN2-227ENST00000616825 GALCP54803 685 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 ATP6V1G3Q96LB4 118 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
ATXN2-227ENST00000616825 REEP2Q9BRK0 252 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 PCDHGB4Q9UN71 923 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-227ENST00000616825 C3orf70A6NLC5 250 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-227ENST00000616825 MAFGO15525 162 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 MTF1Q14872 753 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 EFTUD2Q15029 972 aaKnown RBP eCLIP18.71■□□□□ 0.592e-6■■□□□ 12.5
ATXN2-227ENST00000616825 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 MTHFD1LQ6UB35 978 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 TTC30AQ86WT1 665 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 SLC26A7Q8TE54 656 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 CHP1Q99653 195 aa18.71■□□□□ 0.59
ATXN2-227ENST00000616825 ANKRD65E5RJM6 399 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 SRGNP10124 158 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 AARSP49588 968 aaKnown RBP eCLIP18.7■□□□□ 0.583e-6■■■■■ 61.8
ATXN2-227ENST00000616825 POLE2P56282 527 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 KRT17Q04695 432 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 RIT2Q99578 217 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 DDX50Q9BQ39 737 aaKnown RBP18.7■□□□□ 0.58
ATXN2-227ENST00000616825 A0A1B0GTH6 734 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 SNRNP35Q16560 246 aaKnown RBP18.7■□□□□ 0.58
ATXN2-227ENST00000616825 DYRK4Q9NR20 520 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 ADA2Q9NZK5 511 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
ATXN2-227ENST00000616825 SLC26A4O43511 780 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 MYO1DO94832 1006 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 RASA1P20936 1047 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.7■□□□□ 0.583e-6■■■■■ 50.8
ATXN2-227ENST00000616825 GRAMD1AQ96CP6 724 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 ETNK1Q9HBU6 452 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 WARS2Q9UGM6 360 aaKnown RBP18.7■□□□□ 0.58
ATXN2-227ENST00000616825 CHD1O14646 1710 aa18.7■□□□□ 0.58
ATXN2-227ENST00000616825 PDHBP11177 359 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 CACNB2Q08289 660 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 KCNA1Q09470 495 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 SPATA2LQ8IUW3 424 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 PLEKHA5Q9HAU0 1116 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 ZNF70Q9UC06 446 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 AP3B1O00203 1094 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 CCDC22O60826 627 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 DNAJC6O75061 913 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 TMEM132DQ14C87 1099 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 RCOR2Q8IZ40 523 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 PGBD4Q96DM1 585 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 PIK3R2O00459 728 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 CHUKO15111 745 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 APRTP07741 180 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 TADA2BQ86TJ2 420 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 DPF2Q92785 391 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
ATXN2-227ENST00000616825 USP27XA6NNY8 438 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 GH1P01241 217 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 KCNA2P16389 499 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 LRRC14Q15048 493 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 IER5Q5VY09 327 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 SMIM5Q71RC9 77 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 TEX12Q9BXU0 123 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
ATXN2-227ENST00000616825 NPHP3-ACAD11A0A0J9YXS1 232 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 MYMKA6NI61 221 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 CYBBP04839 570 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 TBCCQ15814 346 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 MED15Q96RN5 788 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 WDR24Q96S15 920 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 KATNAL1Q9BW62 490 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 MRFAP1Q9Y605 127 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 CCDC195A0A1B0GUA6 201 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 DFFAO00273 331 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
ATXN2-227ENST00000616825 SPATA17Q96L03 361 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 CENPKQ9BS16 269 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 KDM6BO15054 1643 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 TARSL2A2RTX5 802 aaKnown RBP18.68■□□□□ 0.58
ATXN2-227ENST00000616825 SSTR3P32745 418 aaPredicted RBP18.68■□□□□ 0.58
ATXN2-227ENST00000616825 GRIK1P39086 918 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
ATXN2-227ENST00000616825 KCTD17Q8N5Z5 321 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 CEP19Q96LK0 163 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms