RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 SUPT20HL2P0C7V6 817 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 SMTNP53814 917 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
LINC00598-207ENST00000616706 NNTQ13423 1086 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 DCAF12L1Q5VU92 463 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 SEPT1Q8WYJ6 367 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 SEMA4DQ92854 862 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
LINC00598-207ENST00000616706 KREMEN1Q96MU8 473 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 APBA2Q99767 749 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 AP1M1Q9BXS5 423 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00598-207ENST00000616706 ZNF302Q9NR11 478 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 AMFRQ9UKV5 643 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 EXOC7Q9UPT5 735 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 USP20Q9Y2K6 914 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 CEP350Q5VT06 3117 aa11.17□□□□□ -0.62
LINC00598-207ENST00000616706 BHMG1C9JSJ3 638 aaPredicted RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 GPR25O00155 361 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 DDX3YO15523 660 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ATG7O95352 703 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 TCF7P36402 384 aaPredicted RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 PRKCEQ02156 737 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 PRKCZQ05513 592 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 PAK2Q13177 524 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 TAS1R3Q7RTX0 852 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 PARD3BQ8TEW8 1205 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 SPIRE2Q8WWL2 714 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 IFT81Q8WYA0 676 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 KIFAP3Q92845 792 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 NTPCRQ9BSD7 190 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 SGPL1O95470 568 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ITGA4P13612 1032 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 SMPD1P17405 629 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 CHRNB2P17787 502 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ECHS1P30084 290 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 OLFML2BQ68BL8 750 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 IQSEC1Q6DN90 963 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 AFAP1L1Q8TED9 768 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 PCDHB18PQ96TA0 734 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 GPR20Q99678 358 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 CFHR5Q9BXR6 569 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 DDX47Q9H0S4 455 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ISCUQ9H1K1 167 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 NOCTQ9UK39 431 aaKnown RBP11.16□□□□□ -0.62
LINC00598-207ENST00000616706 ANK1P16157 1881 aa11.16□□□□□ -0.62
LINC00598-207ENST00000616706 CCDC66A2RUB6 948 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 DKC1O60832 514 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00598-207ENST00000616706 DGAT1O75907 488 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 GH1P01241 217 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 HSPA6P17066 643 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 USP8P40818 1118 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 STAT5BP51692 787 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 HADHBP55084 474 aaKnown RBP11.15□□□□□ -0.62
LINC00598-207ENST00000616706 TNFAIP2Q03169 654 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 ARHGAP1Q07960 439 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 KCTD19Q17RG1 926 aaPredicted RBP11.15□□□□□ -0.62
LINC00598-207ENST00000616706 KRT39Q6A163 491 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 FAM71AQ8IYT1 594 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 PPM1KQ8N3J5 372 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 SHC3Q92529 594 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 GLG1Q92896 1179 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 ELMO3Q96BJ8 720 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 MFSD14AQ96MC6 490 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 ZIM3Q96PE6 472 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 PCYT2Q99447 389 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 AZI2Q9H6S1 392 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 CYP26B1Q9NR63 512 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
LINC00598-207ENST00000616706 CCDC188H7C350 402 aa11.15□□□□□ -0.63
LINC00598-207ENST00000616706 KRIT1O00522 736 aa11.15□□□□□ -0.63
LINC00598-207ENST00000616706 DYNC1LI2O43237 492 aaPredicted RBP11.15□□□□□ -0.63
LINC00598-207ENST00000616706 SART1O43290 800 aaKnown RBP11.15□□□□□ -0.63
LINC00598-207ENST00000616706 FTLP02792 175 aaPredicted RBP11.15□□□□□ -0.63
LINC00598-207ENST00000616706 ZNF865P0CJ78 1059 aaPredicted RBP11.15□□□□□ -0.63
LINC00598-207ENST00000616706 ATP4AP20648 1035 aa11.15□□□□□ -0.63
LINC00598-207ENST00000616706 GUCY2FP51841 1108 aa11.15□□□□□ -0.63
LINC00598-207ENST00000616706 HNRNPH2P55795 449 aaKnown RBP11.15□□□□□ -0.63
LINC00598-207ENST00000616706 CYP24A1Q07973 514 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms