RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 HEBP1Q9NRV9 189 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 MRPS17Q9Y2R5 130 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 HES2Q9Y543 173 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 ATRXP46100 2492 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 C8AP07357 584 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 HOXB3P14651 431 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 XBP1P17861 261 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 SSRP1Q08945 709 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 ST3GAL1Q11201 340 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 CSRP2Q16527 193 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 PLA2G4FQ68DD2 849 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 ANO5Q75V66 913 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 ADAM28Q9UKQ2 775 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 DOCK6Q96HP0 2047 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 RTP2Q5QGT7 225 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 N4BP2L1Q5TBK1 243 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 MCTP1Q6DN14 999 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 RDM1Q8NG50 284 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 PRPF31Q8WWY3 499 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 ING5Q8WYH8 240 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 DDX1Q92499 740 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 CLSTN3Q9BQT9 956 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 JPH2Q9BR39 696 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 PLA2G2FQ9BZM2 168 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 CHRDQ9H2X0 955 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 HCFC1R1Q9NWW0 138 aa19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 NDRG2Q9UN36 371 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-209ENST00000616395 FRYQ5TBA9 3013 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 XYLBO75191 536 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 PSMD10O75832 226 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 HOXA9P31269 272 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 FOXD4L5Q5VV16 416 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 ZNF687Q8N1G0 1237 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 FOXD4L4Q8WXT5 416 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 APOL6Q9BWW8 343 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 MTMR6Q9Y217 621 aa19.49■□□□□ 0.71
TRAPPC3-209ENST00000616395 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 JAK2O60674 1132 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 ECI2O75521 394 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 CTDNEP1O95476 244 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 NPEPPSP55786 919 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 SHC2P98077 582 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 PKP1Q13835 747 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 SIM2Q14190 667 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 PPP2R5DQ14738 602 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 CCDC12Q8WUD4 166 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 TMEM143Q96AN5 459 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 C8orf76Q96K31 380 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 CACNG4Q9UBN1 327 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 ZDHHC9Q9Y397 364 aa19.48■□□□□ 0.71
TRAPPC3-209ENST00000616395 TADA2AO75478 443 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 DEXIO95424 95 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 LAMTOR4Q0VGL1 99 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 ATL3Q6DD88 541 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 B3GNT9Q6UX72 402 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 MAMSTRQ6ZN01 415 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 GSTCDQ8NEC7 633 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 CCDC148Q8NFR7 591 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 SLC7A14Q8TBB6 771 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 PSPC1Q8WXF1 523 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 SLC7A3Q8WY07 619 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 MCRS1Q96EZ8 462 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 DNMT3BQ9UBC3 853 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 KCNH3Q9ULD8 1083 aa19.47■□□□□ 0.71
TRAPPC3-209ENST00000616395 ADAM12O43184 909 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 HRO43593 1189 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 TSPAN1O60635 241 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 ERLIN2O94905 339 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 GNA11P29992 359 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 CCR3P51677 355 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 KRT85P78386 507 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 SRSF5Q13243 272 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 GNL2Q13823 731 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 SAFBQ15424 915 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 PABPC1LQ4VXU2 614 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 IL31Q6EBC2 164 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 RNF149Q8NC42 400 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 LNX1Q8TBB1 728 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 CPB2Q96IY4 423 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 NXF3Q9H4D5 531 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 CFAP45Q9UL16 551 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 KCNJ14Q9UNX9 436 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 GIT1Q9Y2X7 761 aa19.46■□□□□ 0.71
TRAPPC3-209ENST00000616395 SF3B1O75533 1304 aaKnown RBP eCLIP19.45■□□□□ 0.76e-6■■■■■ 103.4
TRAPPC3-209ENST00000616395 MBD3O95983 291 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 PROS1P07225 676 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 AKAP5P24588 427 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 USP11P51784 963 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 NLRP5P59047 1200 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 PSMC5P62195 406 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 ACAP1Q15027 740 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 PSMD5Q16401 504 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 AXDND1Q5T1B0 1012 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms