RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CRKLP46109 303 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 GCLCP48506 637 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 NPEPPSP55786 919 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 UBXN2AP68543 259 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PPATQ06203 517 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 GIT2Q14161 759 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 GRIK5Q16478 980 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PARP10Q53GL7 1025 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 C6orf163Q5TEZ5 329 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CGB2Q6NT52 195 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 LVRNQ6Q4G3 990 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.1□□□□□ -1.27
LMO3-235ENST00000616247 SYT2Q8N9I0 419 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 PHC3Q8NDX5 983 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SH2D3AQ9BRG2 576 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 MKNK1Q9BUB5 465 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 MOV10L1Q9BXT6 1211 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 CCDC134Q9H6E4 229 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 TMEM165Q9HC07 324 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PICK1Q9NRD5 415 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CCDC87Q9NVE4 849 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ARMCX1Q9P291 453 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 WDR35Q9P2L0 1181 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ANAPC7Q9UJX3 599 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 RABGAP1Q9Y3P9 1069 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PCDHA1Q9Y5I3 950 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ARHGAP42A6NI28 874 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 DDX39AO00148 427 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 PDXKO00764 312 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ZBTB39O15060 712 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SGPL1O95470 568 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 NPTXRO95502 500 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ATF7P17544 494 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 CHRNB2P17787 502 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 GNAZP19086 355 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 MAPK4P31152 587 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 RPA3P35244 121 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 PGM1P36871 562 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 DRG2P55039 364 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 KDSRQ06136 332 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CLUL1Q15846 466 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CERKLQ49MI3 558 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 ODR4Q5SWX8 454 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 IRGCQ6NXR0 463 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 LRRC74BQ6ZQY2 392 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ADGRF4Q8IZF3 695 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 MAML1Q92585 1016 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ART4Q93070 314 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 NMD3Q96D46 503 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 LRMDAQ9H2I8 198 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 VCX3BQ9H321 246 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 VCX3AQ9NNX9 186 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SIX2Q9NPC8 291 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 PCMTD2Q9NV79 361 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 APEX2Q9UBZ4 518 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 WASF2Q9Y6W5 498 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ECM29Q5VYK3 1845 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 PI4K2BG5E9Z4 385 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 OAS1P00973 400 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 LDHCP07864 332 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 SLURP2P0DP57 97 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 KITP10721 976 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 PTPN4P29074 926 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 HOXA13P31271 388 aaPredicted RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 NOP14P78316 857 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 MCL1Q07820 350 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 OLFML2BQ68BL8 750 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 SLC51AQ86UW1 340 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 NDNQ99608 321 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 FBXO6Q9NRD1 293 aaPredicted RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 SRCAPQ6ZRS2 3230 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 ZNF804BA4D1E1 1349 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 CIB2O75838 187 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 ENO1P06733 434 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 ITIH2P19823 946 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 MAGEA4P43358 317 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 PPP2R5CQ13362 524 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 MTMR2Q13614 643 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 SPDYCQ5MJ68 293 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 MFSD5Q6N075 450 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 IZUMO2Q6UXV1 221 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 TRIM74Q86UV6 250 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 TRIM73Q86UV7 250 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 NBPF5PQ86XG9 351 aaPredicted RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 ZBED8Q8IZ13 594 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 ANKLE1Q8NAG6 615 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 FAM81AQ8TBF8 368 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 RBM41Q96IZ5 413 aaKnown RBP7.09□□□□□ -1.27
LMO3-235ENST00000616247 RILPQ96NA2 401 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 SMYD3Q9H7B4 428 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 PCYOX1Q9UHG3 505 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 ZNF652Q9Y2D9 606 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms