RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 CLUHO75153 1309 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 PTGESO14684 152 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 TGM5O43548 720 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 MCTP1Q6DN14 999 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 CCDC94Q9BW85 323 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 MRPL4Q9BYD3 311 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 KMT5AQ9NQR1 393 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 ZFP37Q9Y6Q3 630 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 WDR87Q6ZQQ6 2873 aa13.35□□□□□ -0.27
PDLIM2-218ENST00000614502 H3BQV1 296 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 ZMYND10O75800 440 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 MYBP10242 640 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 CLCN5P51795 746 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 PEX3P56589 373 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 NBR1Q14596 966 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 PSMD5Q16401 504 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 ECM1Q16610 540 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 FAM171A1Q5VUB5 890 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 RTL10Q7L3V2 364 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 CEP57Q86XR8 500 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 DDX27Q96GQ7 796 aaKnown RBP13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 KCNK12Q9HB15 430 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 SLC38A7Q9NVC3 462 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 KCND2Q9NZV8 630 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 DCHS1Q96JQ0 3298 aa13.34□□□□□ -0.27
PDLIM2-218ENST00000614502 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.27
PDLIM2-218ENST00000614502 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 F8W810 466 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 SLC26A4O43511 780 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 PI15O43692 258 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 HIP1RO75146 1068 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 KIF4AO95239 1232 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 HOXA9P31269 272 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 GRM5P41594 1212 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 NPTX2P47972 431 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 SMTNP53814 917 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 STRN3Q13033 797 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 ZNF568Q3ZCX4 644 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 GLYCTKQ8IVS8 523 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 FLCNQ8NFG4 579 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 HASPINQ8TF76 798 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 B3GALT6Q96L58 329 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 PAAF1Q9BRP4 392 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 KIFC3Q9BVG8 833 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 FBXW11Q9UKB1 542 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-218ENST00000614502 EP300Q09472 2414 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 E9PMD0 336 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 H0YCG3 227 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 N4BP1O75113 896 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 XYLBO75191 536 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 RFPL2O75678 378 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 B3GAT3O94766 335 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 NPR3P17342 541 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 SCP2P22307 547 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 GUCY2CP25092 1073 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 ATP2C1P98194 919 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 CUL4AQ13619 759 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 NAB2Q15742 525 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 RTP2Q5QGT7 225 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 HYIQ5T013 277 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 ANKS3Q6ZW76 656 aa13.32□□□□□ -0.28
PDLIM2-218ENST00000614502 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms