RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 TMEM62Q0P6H9 643 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 FIGNQ5HY92 759 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 CNKSR3Q6P9H4 555 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 RNF214Q8ND24 703 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 PPP1R13LQ8WUF5 828 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 ABHD8Q96I13 439 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 ZBTB45Q96K62 511 aaPredicted RBP6.78□□□□□ -1.32
CBWD3-210ENST00000614398 SNX27Q96L92 541 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 HTATIP2Q9BUP3 242 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 FBXL5Q9UKA1 691 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 GIT1Q9Y2X7 761 aa6.78□□□□□ -1.32
CBWD3-210ENST00000614398 SCN5AQ14524 2016 aa6.77□□□□□ -1.32
CBWD3-210ENST00000614398 C9IYK1 514 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ZC3H11AO75152 810 aaKnown RBP eCLIP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 BAIAP3O94812 1187 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 AFPP02771 609 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CTSHP09668 335 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 EN2P19622 333 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 RFX1P22670 979 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CD52P31358 61 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 MTIF2P46199 727 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ARID5BQ14865 1188 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ENOX2Q16206 610 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CBWD2Q8IUF1 395 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 LINC01599Q8WXQ3 324 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 PGBD4Q96DM1 585 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CPB2Q96IY4 423 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 PDLIM2Q96JY6 352 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 NDST4Q9H3R1 872 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM8AQ9HCN3 771 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 PLCB1Q9NQ66 1216 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 FAM105AQ9NUU6 356 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM39AQ9NV64 488 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 INTS13Q9NVM9 706 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 RBAKQ9NYW8 714 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 PIN4Q9Y237 131 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 AP5Z1O43299 807 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 NPTXRO95502 500 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 STAG3L1P0CL83 205 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 GHRP10912 638 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 TRIM14Q14142 442 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ZBTB6Q15916 424 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 CEP135Q66GS9 1140 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 DPY19L2P1Q6NXN4 242 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 PLEKHO2Q8TD55 490 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 VWCEQ96DN2 955 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 FAM81BQ96LP2 452 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 FAM213AQ9BRX8 229 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 IFIH1Q9BYX4 1025 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 VRTNQ9H8Y1 702 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 RPF1Q9H9Y2 349 aaKnown RBP6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ANKFY1Q9P2R3 1169 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ATP11BQ9Y2G3 1177 aa6.77□□□□□ -1.33
CBWD3-210ENST00000614398 ABHD14A-ACY1A0A1B0GW23 586 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TRIM43BA6NCK2 446 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 LRRIQ3A6PVS8 624 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 MEFVO15553 781 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 HOXA2O43364 376 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 MGEA5O60502 916 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 MYCP01106 439 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 FMO5P49326 533 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 ATN1P54259 1190 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 UBASH3AP57075 661 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 PPIGQ13427 754 aaKnown RBP eCLIP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 ZACNQ401N2 412 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 EPC2Q52LR7 807 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 ECHDC2Q86YB7 292 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 VSTM4Q8IW00 320 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 RPUSD2Q8IZ73 545 aaKnown RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM199Q8N511 208 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TAF4BQ92750 862 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TRIM43Q96BQ3 446 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 SAAL1Q96ER3 474 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 PCIF1Q9H4Z3 704 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM161AQ9NX61 479 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 TAB2Q9NYJ8 693 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 CALCOCO1Q9P1Z2 691 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 IMPACTQ9P2X3 320 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 MYO6Q9UM54 1294 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 SIK3Q9Y2K2 1263 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 IPPQ9Y573 584 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 PCDHB2Q9Y5E7 798 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 PTPRSQ13332 1948 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 XPOTO43592 962 aaKnown RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 SERPINC1P01008 464 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 C4BPAP04003 597 aaKnown RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 FAM163BP0C2L3 166 aa6.76□□□□□ -1.33
CBWD3-210ENST00000614398 ATF7P17544 494 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-210ENST00000614398 FGFR4P22455 802 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms