RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RNF214Q8ND24 703 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 FAM212AQ96EL1 285 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 CNOT6LQ96LI5 555 aaKnown RBP15.97■□□□□ 0.15
CD48-203ENST00000613788 FNBP1Q96RU3 617 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 TSPAN18Q96SJ8 248 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 ASB7Q9H672 318 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 TET1Q8NFU7 2136 aa15.97■□□□□ 0.15
CD48-203ENST00000613788 TTC26A0AVF1 554 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 LACTBL1A8MY62 500 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 ADRB2P07550 413 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 VAMP7P51809 220 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 HSP90AA4PQ58FG1 418 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 GLB1LQ6UWU2 654 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 TMC2Q8TDI7 906 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 LPPQ93052 612 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 TOP1MTQ969P6 601 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 BORCS6Q96GS4 357 aa15.96■□□□□ 0.15
CD48-203ENST00000613788 KCNJ18B7U540 433 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 ZNF18P17022 549 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
CD48-203ENST00000613788 BFSP1Q12934 665 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 KCNJ12Q14500 433 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 XKR4Q5GH76 650 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 TCP11X2Q5H9J9 407 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 ALKAL1Q6UXT8 129 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 NT5DC4Q86YG4 428 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 CRIPAKQ8N1N5 446 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 PARD3BQ8TEW8 1205 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 CCDC127Q96BQ5 260 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 SNX27Q96L92 541 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 RPS6KC1Q96S38 1066 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 KLK14Q9P0G3 267 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 CNTN3Q9P232 1028 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 LTBP2Q14767 1821 aa15.95■□□□□ 0.14
CD48-203ENST00000613788 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 MEIS3P2A8K0S8 358 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 H0YGN5 161 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 STX10O60499 249 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 OFD1O75665 1012 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 UPP2O95045 317 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 TPM2P07951 284 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 DLATP10515 647 aaKnown RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 MCCD1P59942 119 aaPredicted RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 TCERG1LQ5VWI1 586 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 CACTINQ8WUQ7 758 aaKnown RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 GAD1Q99259 594 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 RBSNQ9H1K0 784 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 KANSL3Q9P2N6 904 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 DERAQ9Y315 318 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.94■□□□□ 0.14
CD48-203ENST00000613788 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 XPOTO43592 962 aaKnown RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 KCNE1P15382 129 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 TNNI1P19237 187 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 MLH1P40692 756 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 AP3M2P53677 418 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 DEFB103AP81534 67 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 WDR49Q8IV35 697 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 TRIM59Q8IWR1 403 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 PHOSPHO2Q8TCD6 241 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 GDF15Q99988 308 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 TUBGCP2Q9BSJ2 902 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 C2CD2Q9Y426 696 aa15.94■□□□□ 0.14
CD48-203ENST00000613788 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.94■□□□□ 0.14
CD48-203ENST00000613788 SMIM28A0A1B0GU29 152 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 INPPL1O15357 1258 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 MEFVO15553 781 aaPredicted RBP15.93■□□□□ 0.14
CD48-203ENST00000613788 THP07101 528 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 FGFR1P11362 822 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 CLDN10P78369 228 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 MLLT1Q03111 559 aaPredicted RBP15.93■□□□□ 0.14
CD48-203ENST00000613788 TMEM132DQ14C87 1099 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 MAN2A1Q16706 1144 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 DUOXA2Q1HG44 320 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 NOMO2Q5JPE7 1267 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 HELQQ8TDG4 1101 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 KIF12Q96FN5 646 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 SLC9A7Q96T83 725 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 CGRRF1Q99675 332 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
CD48-203ENST00000613788 TMEM117Q9H0C3 514 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 SLC38A7Q9NVC3 462 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
CD48-203ENST00000613788 INPP5FQ9Y2H2 1132 aa15.93■□□□□ 0.14
CD48-203ENST00000613788 LRRC10BA6NIK2 292 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 LRRIQ3A6PVS8 624 aaPredicted RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 DGKIO75912 1065 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 GTF2H1P32780 548 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 WNT7BP56706 349 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms